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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ukwA_

Fold library idPDB HeaderMoleculeTitle
c1ukwA_PDB header: oxidoreductaseChain: A: PDB Molecule: acyl-coa dehydrogenase;PDBTitle: crystal structure of medium-chain acyl-coa dehydrogenase2 from thermus thermophilus hb8


Added to library: Tue Mar 16 13:46:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDFSLTEEQRQLQALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEV
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Known secondary structure (DSSP)





TTGGGT


TT
TTTTS
GGGTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence IVGEELAYACMGIYTIPMASDLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRA
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Known secondary structure (DSSP)


GGGTSSS


BTTBSS
GGG


 .........150.........160.........170.........180.........190.........200.........210
Sequence IRQGDHYVLNGTKMWISNGGEAEWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYE
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Known secondary structure (DSSP) TTTTTTS
GGGGGGGTT
TT



SS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAI
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Known secondary structure (DSSP) GGGS
TT

BSSSSBGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVREFPVEK
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Known secondary structure (DSSP) T


GGGGGSTTSS
 .........360.........370.........
Sequence LLRDVKLNQIYEGTNEIQRLIIARHILAA
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Known secondary structure (DSSP) GGGTTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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