PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1buca2

Fold library id	Fold	Superfamily	Family
d1buca2	Acyl-CoA dehydrogenase NM domain-like	Acyl-CoA dehydrogenase NM domain-like	Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains

Links to external resources
Added to library: Tue Mar 16 12:48:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D F N L T D I Q Q D F L K L A H D F G E K K L A P T V T E R D H K G I Y D K E L I D E L L S L G I T G A Y F E E K Y G G S G D D G G D V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T
T T S G G G T T S
G G G T
G G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S Y I L A V E E L A K Y D A G V A I T L S A T V S L C A N P I W Q F G T E A Q K E K F L V P L V E G T K L G A F G L T E P N A G T D A S G Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T S S
B T T B S S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q T I A T K N D D G T Y T L N G S K I F I T N G G A A D I Y I V F A M T D K S K G N H G I T A F I L E D G T P G F T Y G K K E D K M G I H T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T T T
S S
S S S S T T S T T
T T
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . .

Sequence S Q T M E L V F Q D V K V P A E N M L G E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	F	N	L	T	D	I	Q	Q	D	F	L	K	L	A	H	D	F	G	E	K	K	L	A	P	T	V	T	E	R	D	H	K	G	I	Y	D	K	E	L	I	D	E	L	L	S	L	G	I	T	G	A	Y	F	E	E	K	Y	G	G	S	G	D	D	G	G	D	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T	T	T	T								T												T	T	S	G	G	G	T	T	S		G	G	G	T		G	G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	Y	I	L	A	V	E	E	L	A	K	Y	D	A	G	V	A	I	T	L	S	A	T	V	S	L	C	A	N	P	I	W	Q	F	G	T	E	A	Q	K	E	K	F	L	V	P	L	V	E	G	T	K	L	G	A	F	G	L	T	E	P	N	A	G	T	D	A	S	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T																T							T	S	S								B	T	T	B	S	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	T	I	A	T	K	N	D	D	G	T	Y	T	L	N	G	S	K	I	F	I	T	N	G	G	A	A	D	I	Y	I	V	F	A	M	T	D	K	S	K	G	N	H	G	I	T	A	F	I	L	E	D	G	T	P	G	F	T	Y	G	K	K	E	D	K	M	G	I	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S													T	T	T	T		S								S		S	S	S	S	T	T	S								T	T		T	T										S	S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Sequence	S	Q	T	M	E	L	V	F	Q	D	V	K	V	P	A	E	N	M	L	G	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S														G	G	G			S