Email l.a.kelley@imperial.ac.uk Description P37665 Date Wed Jan 25 15:20:53 GMT 2012 Unique Job ID 8b52b1282e6cc1ad

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2l26A_ 100.0 46 PDB header:membrane protein Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922; PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains 2 c2k1sA_ 100.0 100 PDB header:lipoprotein Chain: A: PDB Molecule:inner membrane lipoprotein yiad; PDBTitle: solution nmr structure of the folded c-terminal fragment of yiad from2 escherichia coli. northeast structural genomics consortium target3 er553. 3 c3khnB_ 100.0 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:motb protein, putative; PDBTitle: crystal structure of putative motb like protein dvu_22282 from desulfovibrio vulgaris. 4 c2kgwA_ 100.0 47 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: solution structure of the carboxy-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis 5 d2aizp1 100.0 30 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 6 c3td4D_ 100.0 46 PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate 7 d1r1ma_ 100.0 27 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 8 c1r1mA_ 100.0 27 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein class 4; PDBTitle: structure of the ompa-like domain of rmpm from neisseria2 meningitidis 9 d2hqsc1 100.0 28 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 10 c3cyqM_ 100.0 30 PDB header:membrane protein Chain: M: PDB Molecule:chemotaxis protein motb; PDBTitle: the crystal structure of the complex of the c-terminal domain of2 helicobacter pylori motb (residues 125-256) with n-acetylmuramic acid 11 c2zvyB_ 100.0 21 PDB header:membrane protein Chain: B: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form ii) 12 c3ldtA_ 100.0 28 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein, ompa family protein; PDBTitle: crystal structure of an outer membrane protein(ompa)from2 legionella pneumophila 13 c3oonA_ 99.9 28 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein (tpn50); PDBTitle: the structure of an outer membrance protein from borrelia burgdorferi2 b31 14 c2zovA_ 99.9 24 PDB header:membrane protein Chain: A: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form i) 15 c2zf8A_ 99.8 25 PDB header:structural protein Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor; PDBTitle: crystal structure of moty 16 c2r6hC_ 60.8 25 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:ubiquinone oxidoreductase, na translocating, f PDBTitle: crystal structure of the domain comprising the nad binding and the fad2 binding regions of the nadh:ubiquinone oxidoreductase, na3 translocating, f subunit from porphyromonas gingivalis 17 c2qw5B_ 55.6 11 PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution 18 d1gvha3 51.9 24 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Flavohemoglobin, C-terminal domain 19 c1gvhA_ 51.9 25 PDB header:oxidoreductase Chain: A: PDB Molecule:flavohemoprotein; PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket 20 d1tiaa_ 49.4 21 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 21 c3cqyA_ not modelled 44.1 18 PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1 22 d1tiba_ not modelled 42.9 25 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 23 d1cqxa3 not modelled 38.9 25 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Flavohemoglobin, C-terminal domain 24 c3ngmB_ not modelled 38.6 25 PDB header:hydrolase Chain: B: PDB Molecule:extracellular lipase; PDBTitle: crystal structure of lipase from gibberella zeae 25 c1cqxB_ not modelled 33.4 25 PDB header:lipid binding protein Chain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution 26 c2gpjA_ not modelled 33.3 9 PDB header:fad-binding protein Chain: A: PDB Molecule:siderophore-interacting protein; PDBTitle: crystal structure of a siderophore-interacting protein (sputcn32_0076)2 from shewanella putrefaciens cn-32 at 2.20 a resolution 27 c3qbwA_ not modelled 32.6 21 PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate 28 c3g7nA_ not modelled 32.6 20 PDB header:hydrolase Chain: A: PDB Molecule:lipase; PDBTitle: crystal structure of a triacylglycerol lipase from2 penicillium expansum at 1.3 29 d1krha2 not modelled 31.3 23 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like 30 c3o0dF_ not modelled 30.9 25 PDB header:hydrolase Chain: F: PDB Molecule:triacylglycerol lipase; PDBTitle: crystal structure of lip2 lipase from yarrowia lipolytica at 1.7 a2 resolution 31 c1tvcA_ not modelled 30.7 11 PDB header:oxidoreductase Chain: A: PDB Molecule:methane monooxygenase component c; PDBTitle: fad and nadh binding domain of methane monooxygenase2 reductase from methylococcus capsulatus (bath) 32 d1tvca2 not modelled 29.9 11 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like 33 d1uzhc1 not modelled 26.3 15 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 34 d1uwca_ not modelled 25.2 25 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 35 d1rbli_ not modelled 25.0 22 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 36 d1bxni_ not modelled 24.7 16 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 37 c1amuB_ not modelled 23.7 14 PDB header:peptide synthetase Chain: B: PDB Molecule:gramicidin synthetase 1; PDBTitle: phenylalanine activating domain of gramicidin synthetase 12 in a complex with amp and phenylalanine 38 c3pe3D_ not modelled 22.4 18 PDB header:transferase Chain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n- PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate 39 d1svdm1 not modelled 21.2 24 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 40 c3pa8A_ not modelled 20.6 16 PDB header:toxin/peptide inhibitor Chain: A: PDB Molecule:toxin b; PDBTitle: structure of the c. difficile tcdb cysteine protease domain in complex2 with a peptide inhibitor 41 c3iteB_ not modelled 20.2 17 PDB header:ligase Chain: B: PDB Molecule:sidn siderophore synthetase; PDBTitle: the third adenylation domain of the fungal sidn non-2 ribosomal peptide synthetase 42 d2axla1 not modelled 20.1 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RecQ helicase DNA-binding domain-like 43 d8ruci_ not modelled 16.2 31 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 44 d1xdpa4 not modelled 15.0 18 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 45 c1krhA_ not modelled 14.9 23 PDB header:oxidoreductase Chain: A: PDB Molecule:benzoate 1,2-dioxygenase reductase; PDBTitle: x-ray stucture of benzoate dioxygenase reductase 46 d2o8ra4 not modelled 14.9 24 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 47 c1jrjA_ not modelled 14.8 17 PDB header:hormone/growth factor Chain: A: PDB Molecule:exendin-4; PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol 48 d1bwvs_ not modelled 14.5 19 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 49 d1ir1s_ not modelled 14.3 22 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 50 d1wdds_ not modelled 14.3 27 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 51 d1jmxa1 not modelled 14.3 18 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 52 d1i4ua_ not modelled 14.2 22 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 53 d1r3na1 not modelled 13.9 8 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases 54 c3ds8A_ not modelled 13.4 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2722 protein; PDBTitle: the crysatl structure of the gene lin2722 products from listeria2 innocua 55 d1d4oa_ not modelled 13.4 16 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII) 56 c1pt9B_ not modelled 12.6 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial; PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue 57 c3og9A_ not modelled 12.4 12 PDB header:hydrolase Chain: A: PDB Molecule:protein yahd a copper inducible hydrolase; PDBTitle: structure of yahd with malic acid 58 c3a9lB_ not modelled 12.2 22 PDB header:hydrolase Chain: B: PDB Molecule:poly-gamma-glutamate hydrolase; PDBTitle: structure of bacteriophage poly-gamma-glutamate hydrolase 59 c1nauA_ not modelled 12.1 18 PDB header:hormone/growth factor Chain: A: PDB Molecule:glucagon; PDBTitle: nmr solution structure of the glucagon antagonist [deshis1,2 desphe6, glu9]glucagon amide in the presence of3 perdeuterated dodecylphosphocholine micelles 60 d3tgla_ not modelled 12.1 25 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 61 c2bgjB_ not modelled 12.0 13 PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp(h) reductase; PDBTitle: x-ray structure of the ferredoxin-nadp(h) reductase from2 rhodobacter capsulatus at 2.1 angstroms 62 c3iibA_ not modelled 12.0 15 PDB header:hydrolase Chain: A: PDB Molecule:peptidase m28; PDBTitle: crystal structure of peptidase m28 precursor (yp_926796.1) from2 shewanella amazonensis sb2b at 1.70 a resolution 63 c3l7pA_ not modelled 11.7 21 PDB header:transcription Chain: A: PDB Molecule:putative nitrogen regulatory protein pii; PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans 64 d1tkja1 not modelled 10.9 17 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases 65 d1lgya_ not modelled 10.8 20 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 66 c3ca8B_ not modelled 10.7 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydcf; PDBTitle: crystal structure of escherichia coli ydcf, an s-adenosyl-l-methionine2 utilizing enzyme 67 c2rd5D_ not modelled 10.5 20 PDB header:protein binding Chain: D: PDB Molecule:pii protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana 68 d1saza1 not modelled 10.2 16 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Acetokinase-like 69 c1gplA_ not modelled 10.0 18 PDB header:serine esterase Chain: A: PDB Molecule:rp2 lipase; PDBTitle: rp2 lipase 70 c2ckcA_ not modelled 9.9 23 PDB header:hydrolase Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 7; PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction 71 d2ckca1 not modelled 9.9 23 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 72 c2ogsA_ not modelled 9.9 24 PDB header:hydrolase Chain: A: PDB Molecule:thermostable carboxylesterase est50; PDBTitle: crystal structure of the geobacillus stearothermophilus2 carboxylesterase est55 at ph 6.2 73 c3b9eA_ not modelled 9.9 15 PDB header:hydrolase Chain: A: PDB Molecule:chitinase a; PDBTitle: crystal structure of inactive mutant e315m chitinase a from2 vibrio harveyi 74 c2oghA_ not modelled 9.9 27 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor eif-1; PDBTitle: solution structure of yeast eif1 75 d1e32a3 not modelled 9.8 18 Fold:Cdc48 domain 2-like Superfamily:Cdc48 domain 2-like Family:Cdc48 domain 2-like 76 d1amua_ not modelled 9.8 13 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 77 d1pbya1 not modelled 9.7 11 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 78 d1ej7s_ not modelled 9.3 23 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 79 d2v0ea1 not modelled 9.2 25 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 80 d2nvma1 not modelled 9.0 13 Fold:XisI-like Superfamily:XisI-like Family:XisI-like 81 d1wfya_ not modelled 9.0 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 82 c3eyiB_ not modelled 8.9 33 PDB header:dna binding protein/dna Chain: B: PDB Molecule:z-dna-binding protein 1; PDBTitle: the crystal structure of the second z-dna binding domain of2 human dai (zbp1) in complex with z-dna 83 d1gk8i_ not modelled 8.8 13 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 84 c3mxoB_ not modelled 8.8 15 PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase pgam5, mitochondrial; PDBTitle: crystal structure oh human phosphoglycerate mutase family member 52 (pgam5) 85 d1uzdc1 not modelled 8.6 13 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 86 c1f8uA_ not modelled 8.5 18 PDB header:hydrolase/toxin Chain: A: PDB Molecule:acetylcholinesterase; PDBTitle: crystal structure of mutant e202q of human acetylcholinesterase2 complexed with green mamba venom peptide fasciculin-ii 87 d1f8ua_ not modelled 8.5 18 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Acetylcholinesterase-like 88 c2apnA_ not modelled 8.5 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein hi1723; PDBTitle: hi1723 solution structure 89 c1hplB_ not modelled 8.3 12 PDB header:hydrolase(carboxylic esterase) Chain: B: PDB Molecule:lipase; PDBTitle: horse pancreatic lipase. the crystal structure at 2.32 angstroms resolution 90 c2el7A_ not modelled 7.9 12 PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from thermus2 thermophilus 91 d2nlva1 not modelled 7.9 33 Fold:XisI-like Superfamily:XisI-like Family:XisI-like 92 d1u5ta2 not modelled 7.8 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 93 d1o57a1 not modelled 7.7 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:N-terminal domain of Bacillus PurR 94 d2v6ai1 not modelled 7.6 13 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 95 d1qy7a_ not modelled 7.4 14 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 96 c3b64A_ not modelled 7.3 25 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major 97 d1rp1a2 not modelled 7.3 10 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Pancreatic lipase, N-terminal domain 98 c2pfuA_ not modelled 7.2 11 PDB header:transport protein Chain: A: PDB Molecule:biopolymer transport exbd protein; PDBTitle: nmr strcuture determination of the periplasmic domain of exbd from2 e.coli 99 d2ha2a1 not modelled 7.0 21 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Acetylcholinesterase-like