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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1gvhA_

Fold library idPDB HeaderMoleculeTitle
c1gvhA_PDB header: oxidoreductaseChain: A: PDB Molecule: flavohemoprotein;PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket


Added to library: Tue Mar 16 12:11:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIEN
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Known secondary structure (DSSP)


TT
GGGGGTS


TT

STTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYN
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Known secondary structure (DSSP) GGGGTT




 .........150.........160.........170.........180.........190.........200.........210
Sequence ENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTR
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Known secondary structure (DSSP) STT

SS
SSSTT







TT


TT
SS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KPDGKGYRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDT
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Known secondary structure (DSSP)


SS


TT
T

TT

S





TT

GGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEG
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Known secondary structure (DSSP) T

S
S
TTT

STSSSSS

T

SSS

GGGSSS
 .........360.........370.........380.........390......
Sequence AFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL
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Known secondary structure (DSSP)



TT
S
TT

GGG
SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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