Email l.a.kelley@imperial.ac.uk Description P0AC38 Date Thu Jan 5 11:17:06 GMT 2012 Unique Job ID 86c06610d2097c58

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1jswa_ 100.0 100 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 2 d1j3ua_ 100.0 50 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 3 d1vdka_ 100.0 42 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 4 c1yfmA_ 100.0 38 PDB header:lyase Chain: A: PDB Molecule:fumarase; PDBTitle: recombinant yeast fumarase 5 d1yfma_ 100.0 38 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 6 d1fuoa_ 100.0 40 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 7 c3no9C_ 100.0 40 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis 8 c3ocfB_ 100.0 52 PDB header:lyase Chain: B: PDB Molecule:fumarate lyase:delta crystallin; PDBTitle: crystal structure of fumarate lyase:delta crystallin from brucella2 melitensis in native form 9 c3e04C_ 100.0 40 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase; PDBTitle: crystal structure of human fumarate hydratase 10 d1jswc_ 100.0 100 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 11 c3gtdB_ 100.0 37 PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii 12 c3r6yG_ 100.0 52 PDB header:lyase Chain: G: PDB Molecule:aspartase; PDBTitle: crystal structure of chymotrypsin-treated aspartase from bacillus sp.2 ym55-1 13 c2pfmA_ 100.0 19 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase (purb) from bacillus2 anthracis 14 d1re5a_ 100.0 21 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 15 d1c3ca_ 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 16 d1q5na_ 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 17 d1tj7a_ 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 18 c2e9fC_ 100.0 21 PDB header:lyase Chain: C: PDB Molecule:argininosuccinate lyase; PDBTitle: crystal structure of t.th.hb8 argininosuccinate lyase complexed with2 l-arginine 19 d1i0aa_ 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 20 d1hy0a_ 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 21 d1k62a_ not modelled 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 22 d1tjva_ not modelled 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 23 c3c8tA_ not modelled 100.0 18 PDB header:lyase Chain: A: PDB Molecule:fumarate lyase; PDBTitle: crystal structure of fumarate lyase from mesorhizobium sp. bnc1 24 c2vd6B_ not modelled 100.0 16 PDB header:lyase Chain: B: PDB Molecule:adenylosuccinate lyase; PDBTitle: human adenylosuccinate lyase in complex with its substrate2 n6-(1,2-dicarboxyethyl)-amp, and its products amp and3 fumarate. 25 d1dofa_ not modelled 100.0 17 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 26 c1yisA_ not modelled 100.0 15 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: structural genomics of caenorhabditis elegans: adenylosuccinate lyase 27 c3bhgA_ not modelled 100.0 12 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase from legionella2 pneumophila 28 c2ptsA_ not modelled 100.0 13 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of wild type escherichia coli adenylosuccinate lyase 29 c2qgaC_ not modelled 100.0 17 PDB header:lyase Chain: C: PDB Molecule:adenylosuccinate lyase; PDBTitle: plasmodium vivax adenylosuccinate lyase pv003765 with amp bound 30 c2fenA_ not modelled 100.0 15 PDB header:isomerase Chain: A: PDB Molecule:3-carboxy-cis,cis-muconate lactonizing enzyme; PDBTitle: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium2 radiobacter s2 31 d1f1oa_ not modelled 100.0 15 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 32 c2xgvA_ not modelled 31.8 13 PDB header:viral protein Chain: A: PDB Molecule:psiv capsid n-terminal domain; PDBTitle: structure of the n-terminal domain of capsid protein from2 rabbit endogenous lentivirus (relik) 33 d2ce7a1 not modelled 27.0 18 Fold:FtsH protease domain-like Superfamily:FtsH protease domain-like Family:FtsH protease domain-like 34 d2di4a1 not modelled 26.1 19 Fold:FtsH protease domain-like Superfamily:FtsH protease domain-like Family:FtsH protease domain-like 35 c2di4B_ not modelled 21.1 21 PDB header:hydrolase Chain: B: PDB Molecule:cell division protein ftsh homolog; PDBTitle: crystal structure of the ftsh protease domain 36 c3lq9B_ not modelled 20.9 26 PDB header:signaling protein Chain: B: PDB Molecule:dna-damage-inducible transcript 4 protein; PDBTitle: crystal strucure of human redd1, a hypoxia-induced regulator2 of mtor 37 d1lbua1 not modelled 20.3 26 Fold:PGBD-like Superfamily:PGBD-like Family:Peptidoglycan binding domain, PGBD 38 d2dy1a3 not modelled 19.5 15 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 39 c2ctoA_ not modelled 15.4 42 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:novel protein; PDBTitle: solution structure of the hmg box like domain from human2 hypothetical protein flj14904 40 c3fbtB_ not modelled 14.8 17 PDB header:oxidoreductase, lyase Chain: B: PDB Molecule:chorismate mutase and shikimate 5-dehydrogenase PDBTitle: crystal structure of a chorismate mutase/shikimate 5-2 dehydrogenase fusion protein from clostridium3 acetobutylicum 41 c3bbnC_ not modelled 14.3 50 PDB header:ribosome Chain: C: PDB Molecule:ribosomal protein s3; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 42 c1dipA_ not modelled 13.8 22 PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures 43 c3hzsA_ not modelled 12.5 11 PDB header:transferase Chain: A: PDB Molecule:monofunctional glycosyltransferase; PDBTitle: s. aureus monofunctional glycosyltransferase (mtga)in complex with2 moenomycin 44 d2bv3a3 not modelled 12.5 20 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 45 d1h8ba_ not modelled 11.9 13 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 46 d1nvta2 not modelled 11.7 13 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 47 c3m1eA_ not modelled 11.6 16 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd 48 d1vi2a2 not modelled 11.4 14 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 49 d1u5ta1 not modelled 11.3 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 50 c2fgyA_ not modelled 11.0 9 PDB header:lyase Chain: A: PDB Molecule:carboxysome shell polypeptide; PDBTitle: beta carbonic anhydrase from the carboxysomal shell of2 halothiobacillus neapolitanus (csosca) 51 d1q3ma_ not modelled 10.5 23 Fold:GLA-domain Superfamily:GLA-domain Family:GLA-domain 52 c3bkhA_ not modelled 10.3 22 PDB header:hydrolase Chain: A: PDB Molecule:lytic transglycosylase; PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144 53 c2ev9B_ not modelled 9.9 29 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate 54 d2fug21 not modelled 9.9 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like 55 d1q8ha_ not modelled 9.6 19 Fold:GLA-domain Superfamily:GLA-domain Family:GLA-domain 56 c1q8hA_ not modelled 9.6 19 PDB header:metal binding protein Chain: A: PDB Molecule:osteocalcin; PDBTitle: crystal structure of porcine osteocalcin 57 d1m9dc_ not modelled 9.2 15 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 58 c3tozA_ not modelled 9.2 33 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. 59 d2b0ja1 not modelled 9.1 16 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:HMD dimerization domain-like 60 c1nvtA_ not modelled 8.8 13 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ 61 d1npya2 not modelled 8.8 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 62 c2hk8B_ not modelled 8.3 13 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution 63 c3iz5U_ not modelled 8.1 19 PDB header:ribosome Chain: U: PDB Molecule:60s ribosomal protein l21 (l21e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 64 d2qalc1 not modelled 8.0 38 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 65 d1p77a2 not modelled 7.5 14 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 66 c3pwzA_ not modelled 7.3 13 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida 67 d1pbya1 not modelled 7.2 23 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 68 d1nyta2 not modelled 6.8 15 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 69 c1p74B_ not modelled 6.8 13 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae 70 c1wjvA_ not modelled 6.7 44 PDB header:dna binding protein Chain: A: PDB Molecule:cell growth regulating nucleolar protein lyar; PDBTitle: solution structure of the n-terminal zinc finger domain of2 mouse cell growth regulating nucleolar protein lyar 71 d1jmxa1 not modelled 6.6 10 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 72 c3izcU_ not modelled 6.6 26 PDB header:ribosome Chain: U: PDB Molecule:60s ribosomal protein rpl21 (l21e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 73 c2zmeA_ not modelled 6.4 8 PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex 74 d2pxrc1 not modelled 6.3 15 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 75 c2eggA_ not modelled 6.3 13 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus 76 c1u5tA_ not modelled 6.3 16 PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex 77 d2nr7a1 not modelled 6.1 26 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:NMB1012-like 78 c1npyA_ not modelled 6.1 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 79 c3u62A_ not modelled 6.0 29 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima 80 d2uubc1 not modelled 5.9 33 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 81 c3ff5B_ not modelled 5.9 35 PDB header:protein transport Chain: B: PDB Molecule:peroxisomal biogenesis factor 14; PDBTitle: crystal structure of the conserved n-terminal domain of the2 peroxisomal matrix-protein-import receptor, pex14p 82 c3no7A_ not modelled 5.9 16 PDB header:dna binding protein Chain: A: PDB Molecule:putative plasmid related protein; PDBTitle: crystal structure of the centromere-binding protein parb from plasmid2 pcxc100 83 c3cuqA_ not modelled 5.9 9 PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex 84 c3a8yD_ not modelled 5.8 14 PDB header:hydrolase Chain: D: PDB Molecule:bag family molecular chaperone regulator 5; PDBTitle: crystal structure of the complex between the bag5 bd5 and2 hsp70 nbd 85 c2nloA_ not modelled 5.8 13 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum 86 d2oqoa1 not modelled 5.8 13 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:PBP transglycosylase domain-like 87 d2ga1a1 not modelled 5.7 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Alr1493-like 88 c1b9nA_ not modelled 5.7 17 PDB header:transcription Chain: A: PDB Molecule:protein (mode); PDBTitle: regulator from escherichia coli 89 c1lbuA_ not modelled 5.6 23 PDB header:hydrolase Chain: A: PDB Molecule:muramoyl-pentapeptide carboxypeptidase; PDBTitle: hydrolase metallo (zn) dd-peptidase 90 d1g3pa2 not modelled 5.5 27 Fold:N-terminal domains of the minor coat protein g3p Superfamily:N-terminal domains of the minor coat protein g3p Family:N-terminal domains of the minor coat protein g3p 91 d2olua1 not modelled 5.2 11 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:PBP transglycosylase domain-like 92 c3nojA_ not modelled 5.2 13 PDB header:lyase Chain: A: PDB Molecule:4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate PDBTitle: the structure of hmg/cha aldolase from the protocatechuate degradation2 pathway of pseudomonas putida 93 d2d28c1 not modelled 5.1 20 Fold:Alpha-lytic protease prodomain-like Superfamily:EspE N-terminal domain-like Family:GSPII protein E N-terminal domain-like 94 d1k6ya1 not modelled 5.1 32 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 95 d1wjfa_ not modelled 5.1 32 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase