Email l.a.kelley@imperial.ac.uk Description P37757 Date Thu Jan 5 11:57:29 GMT 2012 Unique Job ID 846e28bc1a63b25d

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1qy9B_ 100.0 98 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ydde; PDBTitle: crystal structure of e. coli se-met protein ydde 2 c3ednB_ 100.0 32 PDB header:biosynthetic protein Chain: B: PDB Molecule:phenazine biosynthesis protein, phzf family; PDBTitle: crystal structure of the bacillus anthracis phenazine2 biosynthesis protein, phzf family 3 c1ym5A_ 100.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical 32.6 kda protein in dap2-slt2 PDBTitle: crystal structure of yhi9, the yeast member of the2 phenazine biosynthesis phzf enzyme superfamily. 4 c1u1wA_ 100.0 30 PDB header:isomerase, lyase Chain: A: PDB Molecule:phenazine biosynthesis protein phzf; PDBTitle: structure and function of phenazine-biosynthesis protein phzf from2 pseudomonas fluorescens 2-79 5 c1u0kA_ 100.0 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gene product pa4716; PDBTitle: the structure of a predicted epimerase pa4716 from pseudomonas2 aeruginosa 6 d1s7ja_ 100.0 31 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 7 c3ekmE_ 100.0 16 PDB header:isomerase Chain: E: PDB Molecule:diaminopimelate epimerase, chloroplastic; PDBTitle: crystal structure of diaminopimelate epimerase form2 arabidopsis thaliana in complex with irreversible inhibitor3 dl-azidap 8 c2otnB_ 100.0 16 PDB header:isomerase Chain: B: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of the catalytically active form of diaminopimelate2 epimerase from bacillus anthracis 9 c2gkjA_ 100.0 15 PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase in complex2 with an irreversible inhibitor dl-azidap 10 c2azpA_ 100.0 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa1268; PDBTitle: crystal structure of pa1268 solved by sulfur sad 11 c1w62B_ 100.0 13 PDB header:racemase Chain: B: PDB Molecule:b-cell mitogen; PDBTitle: proline racemase in complex with one molecule of pyrrole-2-2 carboxylic acid (hemi form) 12 d1qy9a1 100.0 99 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 13 c3fveA_ 100.0 16 PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase mycobacterium2 tuberculosis dapf 14 d1u0ka1 100.0 26 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 15 d1xuba1 100.0 33 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 16 d1qy9a2 100.0 98 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 17 d1tm0a_ 100.0 14 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Proline racemase 18 d1xuba2 100.0 30 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 19 d1u0ka2 99.9 30 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PhzC/PhzF-like 20 d2gkea1 99.9 20 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase 21 d2gkea2 not modelled 99.8 13 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase 22 c3g7kD_ not modelled 98.2 16 PDB header:isomerase Chain: D: PDB Molecule:3-methylitaconate isomerase; PDBTitle: crystal structure of methylitaconate-delta-isomerase 23 c2pw0A_ not modelled 98.1 18 PDB header:unknown function Chain: A: PDB Molecule:prpf methylaconitate isomerase; PDBTitle: crystal structure of trans-aconitate bound to methylaconitate2 isomerase prpf from shewanella oneidensis 24 d2h9fa2 not modelled 96.0 23 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:PA0793-like 25 c3ldgA_ not modelled 40.2 18 PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein smu.472; PDBTitle: crystal structure of smu.472, a putative methyltransferase complexed2 with sah 26 c3k0bA_ not modelled 38.8 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365 27 d1g60a_ not modelled 36.5 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Type II DNA methylase 28 d1booa_ not modelled 33.8 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Type II DNA methylase 29 c2zifB_ not modelled 32.7 23 PDB header:transferase Chain: B: PDB Molecule:putative modification methylase; PDBTitle: crystal structure of ttha0409, putative dna modification2 methylase from thermus thermophilus hb8- complexed with s-3 adenosyl-l-methionine 30 d1euza2 not modelled 31.7 26 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 31 d1bgva2 not modelled 31.5 19 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 32 d1v9la2 not modelled 31.0 19 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 33 c1nw6A_ not modelled 29.6 19 PDB header:transferase Chain: A: PDB Molecule:modification methylase rsri; PDBTitle: structure of the beta class n6-adenine dna methyltransferase rsri2 bound to sinefungin 34 d1o9ga_ not modelled 28.7 27 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:rRNA methyltransferase AviRa 35 d1gtma2 not modelled 26.6 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 36 d1eg2a_ not modelled 24.2 17 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Type II DNA methylase 37 c3lduA_ not modelled 23.6 26 PDB header:transferase Chain: A: PDB Molecule:putative methylase; PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630. 38 d1bvua2 not modelled 23.4 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 39 d2ar0a1 not modelled 22.3 36 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like 40 d2fug21 not modelled 21.7 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like 41 d1b26a2 not modelled 21.7 26 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 42 c2waqG_ not modelled 20.6 27 PDB header:transcription Chain: G: PDB Molecule:dna-directed rna polymerase rpo8 subunit; PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase 43 c3khkA_ not modelled 20.2 21 PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei. 44 d1hwxa2 not modelled 19.3 29 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 45 d2okca1 not modelled 17.8 29 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like 46 c2l3bA_ not modelled 17.4 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of the bt_0084 lipoprotein from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr376 47 d2f8la1 not modelled 17.2 36 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like 48 c2l7qA_ not modelled 16.3 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of conjugate transposon protein bvu_1572(27-2 141) from bacteroides vulgatus, northeast structural genomics3 consortium target bvr155 49 c3p9nA_ not modelled 16.1 21 PDB header:transferase Chain: A: PDB Molecule:possible methyltransferase (methylase); PDBTitle: rv2966c of m. tuberculosis is a rsmd-like methyltransferase 50 c1g38A_ not modelled 15.4 7 PDB header:transferase/dna Chain: A: PDB Molecule:modification methylase taqi; PDBTitle: adenine-specific methyltransferase m. taq i/dna complex 51 c3sb1B_ not modelled 15.4 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hydrogenase expression protein; PDBTitle: hydrogenase expression protein huph from thiobacillus denitrificans2 atcc 25259 52 c1aqjB_ not modelled 15.4 7 PDB header:methyltransferase Chain: B: PDB Molecule:adenine-n6-dna-methyltransferase taqi; PDBTitle: structure of adenine-n6-dna-methyltransferase taqi 53 d1uhsa_ not modelled 15.2 35 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 54 d2ih2a1 not modelled 14.0 7 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:DNA methylase TaqI, N-terminal domain 55 d1l1fa2 not modelled 14.0 29 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 56 c3lkdB_ not modelled 13.5 21 PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 57 d1s7ea1 not modelled 13.2 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 58 d1j6ua1 not modelled 13.1 12 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 59 d1ko7a1 not modelled 13.1 13 Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:HPr kinase/phoshatase HprK N-terminal domain 60 d2p81a1 not modelled 12.2 41 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 61 c3itcA_ not modelled 12.2 13 PDB header:hydrolase Chain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol 62 c3k8zD_ not modelled 11.8 19 PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis 63 d1pjza_ not modelled 11.7 24 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Thiopurine S-methyltransferase 64 c3c6vB_ not modelled 11.2 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:probable tautomerase/dehalogenase au4130; PDBTitle: crystal structure of au4130/apc7354, a probable enzyme from the2 thermophilic fungus aspergillus fumigatus 65 c1v9lA_ not modelled 11.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad 66 d1e3oc1 not modelled 11.0 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 67 d1knxa1 not modelled 10.9 3 Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:HPr kinase/phoshatase HprK N-terminal domain 68 d1wy7a1 not modelled 10.8 33 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Ta1320-like 69 c2i5gB_ not modelled 10.6 23 PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal strcuture of amidohydrolase from pseudomonas2 aeruginosa 70 c1bvuF_ not modelled 10.4 23 PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis 71 c2vi6F_ not modelled 10.3 41 PDB header:transcription Chain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain 72 c2da4A_ not modelled 10.3 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dkfzp686k21156; PDBTitle: solution structure of the homeobox domain of the2 hypothetical protein, dkfzp686k21156 73 c3lu2B_ not modelled 10.2 14 PDB header:hydrolase Chain: B: PDB Molecule:lmo2462 protein; PDBTitle: structure of lmo2462, a listeria monocytogenes amidohydrolase family2 putative dipeptidase 74 d1o4xa1 not modelled 10.1 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 75 c3s1sA_ not modelled 10.0 29 PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi 76 d1p7ia_ not modelled 9.8 41 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 77 c2da2A_ not modelled 9.7 5 PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the second homeobox domain of at-2 binding transcription factor 1 (atbf1) 78 c2tmgD_ not modelled 9.5 26 PDB header:oxidoreductase Chain: D: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: thermotoga maritima glutamate dehydrogenase mutant s128r,2 t158e, n117r, s160e 79 d1ne2a_ not modelled 9.4 36 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Ta1320-like 80 d2hi3a1 not modelled 9.3 35 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 81 d1ws6a1 not modelled 9.3 29 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:YhhF-like 82 c2da1A_ not modelled 9.2 29 PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the first homeobox domain of at-2 binding transcription factor 1 (atbf1) 83 d2ifta1 not modelled 9.0 21 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:YhhF-like 84 c2yfqA_ not modelled 9.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus 85 c2l9rA_ not modelled 8.9 29 PDB header:transcription Chain: A: PDB Molecule:homeobox protein nkx-3.1; PDBTitle: solution nmr structure of homeobox domain of homeobox protein nkx-3.12 from homo sapiens, northeast structural genomics consortium target3 hr6470a 86 d2cqxa1 not modelled 8.8 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 87 c2ragB_ not modelled 8.8 27 PDB header:hydrolase Chain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus 88 d2cuea1 not modelled 8.7 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 89 c3aogA_ not modelled 8.7 19 PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) 90 d1au7a1 not modelled 8.6 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 91 c2dmuA_ not modelled 8.5 15 PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein goosecoid; PDBTitle: solution structure of the homeobox domain of homeobox2 protein goosecoid 92 d1jgga_ not modelled 8.5 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 93 d2j85a1 not modelled 8.5 20 Fold:STIV B116-like Superfamily:STIV B116-like Family:STIV B116-like 94 c3fdgA_ not modelled 8.4 27 PDB header:hydrolase Chain: A: PDB Molecule:dipeptidase ac. metallo peptidase. merops family m19; PDBTitle: the crystal structure of the dipeptidase ac, metallo peptidase. merops2 family m19 95 d2hddb_ not modelled 8.1 41 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 96 d1f43a_ not modelled 8.1 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 97 d1le8a_ not modelled 8.0 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 98 d1ztra1 not modelled 7.9 41 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 99 c1ko7B_ not modelled 7.9 13 PDB header:transferase,hydrolase Chain: B: PDB Molecule:hpr kinase/phosphatase; PDBTitle: x-ray structure of the hpr kinase/phosphatase from2 staphylococcus xylosus at 1.95 a resolution