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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2gkjA_

Fold library idPDB HeaderMoleculeTitle
c2gkjA_PDB header: isomeraseChain: A: PDB Molecule: diaminopimelate epimerase;PDBTitle: crystal structure of diaminopimelate epimerase in complex2 with an irreversible inhibitor dl-azidap


Added to library: Tue Mar 16 13:10:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEV
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Known secondary structure (DSSP)
TT
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S

SSTTSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYI
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Known secondary structure (DSSP) S

TTS


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B

GGGTT


SS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERG
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SSS
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TT
TT

TTTT
 .........220.........230.........240.........250.........260.........270....
Sequence AGETQACGSGACAAVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL
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Known secondary structure (DSSP) T
S

TTSS
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TTS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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