Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ym5A_

Fold library idPDB HeaderMoleculeTitle
c1ym5A_PDB header: oxidoreductaseChain: A: PDB Molecule: hypothetical 32.6 kda protein in dap2-slt2PDBTitle: crystal structure of yhi9, the yeast member of the2 phenazine biosynthesis phzf enzyme superfamily.


Added to library: Tue Mar 16 11:58:45 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLMVPFKQVDVFTEKPFMGNPVAVINFLEIDENEVSQEELQAIANWTNLSETTFLFKPSDKKYDYKLRIF
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
T
SSTTSS
TTS
GGGS
TSS


SSTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPRSELPFAGHPTIGSCKAFLEFTKNTTATSLVQECKIGAVPITINEGLISFKAPMADYESISSEMIADY
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
SS
S

TT
S

STTTT
S



 .........150.........160.........170.........180.........190.........200.........210
Sequence EKAIGLKFIKPPALLHTGPEWIVALVEDAETCFNANPNFAMLAHQTKQNDHVGIILAGPKKEAAIKNSYE
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TS

SS

SSS
S




T


TT
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence MRAFAPVINVYEDPVCGSGSVALARYLQEVYKFEKTTDITISEGGRLKRNGLMLASIKKEADNSTSYYIA
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) GGGTSS


SS

GGGT


TTS
 .........290....
Sequence GHATTVIDGKIKVH
Predicted secondary structure
SS confidence













Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D