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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3g7kD_

Fold library idPDB HeaderMoleculeTitle
c3g7kD_PDB header: isomeraseChain: D: PDB Molecule: 3-methylitaconate isomerase;PDBTitle: crystal structure of methylitaconate-delta-isomerase


Added to library: Sat Aug 28 23:38:21 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDQMRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTH
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Known secondary structure (DSSP)

TTGGGS
SST
S
TT
TTSSS
SSGGG


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVED
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Known secondary structure (DSSP) TT
S
SSSS

SS

TTGGGGTTSS


SSTTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKAKVSGDCKIDGVPGTNAPELMDFSDTAGAATGKVLPTGNVVDVLSTSKGDIDVSIVDVANPCIFVHAK
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Known secondary structure (DSSP) T



SB

TTSSS
B


GGGBTTTTSSSSTTS
SS

TTS
BSSSG
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEASEKSPAFPMIAFVTKPEDYVDFSTGNT
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Known secondary structure (DSSP) GGT

S


T
TS
SS
SSSS




TTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence ISGDDVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLRDTGDEDTVRIGHPAGVIPVVSIVK
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Known secondary structure (DSSP)
TTS
STT
SS

TSTTSS


TT

TT
 .........360.........370.........
Sequence DGKVEKAALIRTARRIMEGYVYVEKAKLV
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Known secondary structure (DSSP) TT
GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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