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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3ekmE_

Fold library idPDB HeaderMoleculeTitle
c3ekmE_PDB header: isomeraseChain: E: PDB Molecule: diaminopimelate epimerase, chloroplastic;PDBTitle: crystal structure of diaminopimelate epimerase form2 arabidopsis thaliana in complex with irreversible inhibitor3 dl-azidap


Added to library: Tue Mar 16 13:31:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGS
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Known secondary structure (DSSP)
TT
TT
SS
SS

TTTSS

S
STT
STTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKG
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Known secondary structure (DSSP)

S

T

SS

TT
TTS




B

GGGTT
SS

SBT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVL
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Known secondary structure (DSSP) TB

STTSSSSSBTT




GGG

T
TT
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAV
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Known secondary structure (DSSP) TTTTT
S

TTSS
STT
TTTS


 .......
Sequence FYGSALL
Predicted secondary structure
SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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