PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3fdgA_

Fold library id	PDB Header	Molecule	Title
c3fdgA_	PDB header: hydrolase	Chain: A: PDB Molecule: dipeptidase ac. metallo peptidase. merops family	PDBTitle: the crystal structure of the dipeptidase ac, metallo2 peptidase. merops family m19

Links to external resources
Added to library: Tue Mar 16 13:33:34 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E T I P V F D G H N D F L L R L L R N P A N R E T I W L K G D G T G H L D L P R M K E G G F A G G F F A I Y V P S P P F E L P L P P M I R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
S
S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E Q A Q P V A L A M A G H L L W M E R A A R G R F K V C R T A A E V R S C H A D G I V S G I M H M E G A E A I G A D L D A L H L F H S L G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T
S
T T S
T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R S L G P V W S R P T V F G H G V P F R F P G S P D T G E G L T E A G R R L V A E C N R L K I M L D L S H L N E K G F D D V A R L S D A P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
S S
B
S
S
S
T
T T B
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V A T H S N A H A V T P S T R N L T D R Q L A M I R E S R G M V G L N F A T S F L R E D G R R S A E M G W E P V L R H L D H L I D R L G E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B T T T S
T T S B
T T
S T T
S
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . .

Sequence H V G M G S D F D G A T I P Q G I A D V T G L P A L Q A A M R A H G Y D E P L M R K L C H E N W Y G L L E R S W G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B T T S
T T T
S G G G T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	T	I	P	V	F	D	G	H	N	D	F	L	L	R	L	L	R	N	P	A	N	R	E	T	I	W	L	K	G	D	G	T	G	H	L	D	L	P	R	M	K	E	G	G	F	A	G	G	F	F	A	I	Y	V	P	S	P	P	F	E	L	P	L	P	P	M	I	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G							T			S		S	S										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	Q	A	Q	P	V	A	L	A	M	A	G	H	L	L	W	M	E	R	A	A	R	G	R	F	K	V	C	R	T	A	A	E	V	R	S	C	H	A	D	G	I	V	S	G	I	M	H	M	E	G	A	E	A	I	G	A	D	L	D	A	L	H	L	F	H	S	L	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T	S						S											T										S		T	T	S		T	T											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	S	L	G	P	V	W	S	R	P	T	V	F	G	H	G	V	P	F	R	F	P	G	S	P	D	T	G	E	G	L	T	E	A	G	R	R	L	V	A	E	C	N	R	L	K	I	M	L	D	L	S	H	L	N	E	K	G	F	D	D	V	A	R	L	S	D	A	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S	S	S			S	S			B						S			S			S																		T						T	T	B													S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	A	T	H	S	N	A	H	A	V	T	P	S	T	R	N	L	T	D	R	Q	L	A	M	I	R	E	S	R	G	M	V	G	L	N	F	A	T	S	F	L	R	E	D	G	R	R	S	A	E	M	G	W	E	P	V	L	R	H	L	D	H	L	I	D	R	L	G	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			B	T	T	T	S			T	T	S	B											T	T													S	T	T									S																T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Sequence	H	V	G	M	G	S	D	F	D	G	A	T	I	P	Q	G	I	A	D	V	T	G	L	P	A	L	Q	A	A	M	R	A	H	G	Y	D	E	P	L	M	R	K	L	C	H	E	N	W	Y	G	L	L	E	R	S	W	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							B	T	T	S				T	T	T		S	G	G	G												T											T