Email l.a.kelley@imperial.ac.uk Description P05100 Date Thu Jan 5 10:58:41 GMT 2012 Unique Job ID 79deeb2203b51139

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1nkua_ 100.0 98 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:3-Methyladenine DNA glycosylase I (Tag) 2 c2jg6A_ 100.0 43 PDB header:hydrolase Chain: A: PDB Molecule:dna-3-methyladenine glycosidase; PDBTitle: crystal structure of a 3-methyladenine dna glycosylase i2 from staphylococcus aureus 3 d1keaa_ 97.3 12 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Mismatch glycosylase 4 d1orna_ 96.5 18 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Endonuclease III 5 c3n5nX_ 96.3 19 PDB header:hydrolase Chain: X: PDB Molecule:a/g-specific adenine dna glycosylase; PDBTitle: crystal structure analysis of the catalytic domain and interdomain2 connector of human muty homologue 6 d1rrqa1 96.2 15 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Mismatch glycosylase 7 d1kg2a_ 96.0 18 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Mismatch glycosylase 8 d1pu6a_ 96.0 19 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:3-Methyladenine DNA glycosylase III (MagIII) 9 c3fhgA_ 94.8 13 PDB header:dna repair, hydrolase, lyase Chain: A: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: crystal structure of sulfolobus solfataricus 8-oxoguanine dna2 glycosylase (ssogg) 10 d2abka_ 94.1 18 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Endonuclease III 11 c2yg8B_ 91.6 15 PDB header:hydrolase Chain: B: PDB Molecule:dna-3-methyladenine glycosidase ii, putative; PDBTitle: structure of an unusual 3-methyladenine dna glycosylase ii (2 alka) from deinococcus radiodurans 12 c3n0uB_ 91.2 16 PDB header:hydrolase, lyase Chain: B: PDB Molecule:probable n-glycosylase/dna lyase; PDBTitle: crystal structure of tm1821, the 8-oxoguanine dna glycosylase of2 thermotoga maritima 13 c3kntC_ 91.2 13 PDB header:hydrolase, lyase/dna Chain: C: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: crystal structure of methanocaldococcus jannaschii 8-2 oxoguanine glycosylase/lyase in complex with 15mer dna3 containing 8-oxoguanine 14 c1rrqA_ 89.8 15 PDB header:hydrolase/dna Chain: A: PDB Molecule:muty; PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair 15 d1ngna_ 89.1 14 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Mismatch glycosylase 16 c3s6iA_ 81.5 15 PDB header:hydrolase/dna Chain: A: PDB Molecule:dna-3-methyladenine glycosylase 1; PDBTitle: schizosaccaromyces pombe 3-methyladenine dna glycosylase (mag1) in2 complex with abasic-dna. 17 d1mpga1 75.7 24 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:DNA repair glycosylase, 2 C-terminal domains 18 c1oxjA_ 68.7 16 PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein smaug; PDBTitle: crystal structure of the smaug rna binding domain 19 d1oxja1 62.4 14 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 20 c3hjzA_ 61.2 25 PDB header:transferase Chain: A: PDB Molecule:transaldolase b; PDBTitle: the structure of an aldolase from prochlorococcus marinus 21 c2eseA_ not modelled 59.4 18 PDB header:protein/rna complex Chain: A: PDB Molecule:vts1p; PDBTitle: structure of the sam domain of vts1p in complex with rna 22 c2vtgA_ not modelled 55.2 13 PDB header:metal-binding protein Chain: A: PDB Molecule:ionized calcium-binding adapter molecule 2; PDBTitle: crystal structure of human iba2, trigonal crystal form 23 c2fe9A_ not modelled 55.2 18 PDB header:rna binding protein Chain: A: PDB Molecule:protein vts1; PDBTitle: solution structure of the vts1 sam domain in the presence2 of rna 24 c2b6gA_ not modelled 54.7 18 PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain 25 d2noha1 not modelled 51.2 18 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:DNA repair glycosylase, 2 C-terminal domains 26 c2g2bA_ not modelled 50.0 15 PDB header:immune system Chain: A: PDB Molecule:allograft inflammatory factor 1; PDBTitle: nmr structure of the human allograft inflammatory factor 1 27 c2hjwA_ not modelled 49.1 23 PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: crystal structure of the bc domain of acc2 28 d1a9xa2 not modelled 47.6 25 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain 29 c3k1rB_ not modelled 46.7 19 PDB header:structural protein Chain: B: PDB Molecule:usher syndrome type-1g protein; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans 30 c2d58A_ not modelled 46.1 16 PDB header:metal binding protein Chain: A: PDB Molecule:allograft inflammatory factor 1; PDBTitle: human microglia-specific protein iba1 31 c2e8nA_ not modelled 45.6 25 PDB header:transferase, signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 2; PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1) 32 d1wg8a1 not modelled 43.9 26 Fold:SAM domain-like Superfamily:Putative methyltransferase TM0872, insert domain Family:Putative methyltransferase TM0872, insert domain 33 c3m16A_ not modelled 42.4 26 PDB header:transferase Chain: A: PDB Molecule:transaldolase; PDBTitle: structure of a transaldolase from oleispira antarctica 34 d1coka_ not modelled 41.7 14 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 35 d1onra_ not modelled 41.7 23 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 36 c2yvqA_ not modelled 41.4 19 PDB header:ligase Chain: A: PDB Molecule:carbamoyl-phosphate synthase; PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens 37 c3igxA_ not modelled 40.9 20 PDB header:transferase Chain: A: PDB Molecule:transaldolase; PDBTitle: 1.85 angstrom resolution crystal structure of transaldolase b (tala)2 from francisella tularensis. 38 c2jhnB_ not modelled 35.8 22 PDB header:hydrolase Chain: B: PDB Molecule:3-methyladenine dna-glycosylase; PDBTitle: 3-methyladenine dna-glycosylase from archaeoglobus fulgidus 39 c2h56C_ not modelled 31.3 15 PDB header:hydrolase Chain: C: PDB Molecule:dna-3-methyladenine glycosidase; PDBTitle: crystal structure of dna-3-methyladenine glycosidase (10174367) from2 bacillus halodurans at 2.55 a resolution 40 d1zkda1 not modelled 31.2 28 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:RPA4359-like 41 d1kjna_ not modelled 30.3 36 Fold:Hypothetical protein MTH777 (MT0777) Superfamily:Hypothetical protein MTH777 (MT0777) Family:Hypothetical protein MTH777 (MT0777) 42 c2hnhA_ not modelled 30.2 14 PDB header:transferase Chain: A: PDB Molecule:dna polymerase iii alpha subunit; PDBTitle: crystal structure of the catalytic alpha subunit of e. coli2 replicative dna polymerase iii 43 d1f05a_ not modelled 30.1 23 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 44 c2fe3B_ not modelled 30.1 27 PDB header:dna binding protein Chain: B: PDB Molecule:peroxide operon regulator; PDBTitle: the crystal structure of bacillus subtilis perr-zn reveals a novel2 zn(cys)4 structural redox switch 45 c2dl0A_ not modelled 29.2 14 PDB header:signaling protein Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1 46 d1zcza1 not modelled 29.2 14 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Inosicase 47 c2uv1B_ not modelled 28.9 45 PDB header:inhibitor Chain: B: PDB Molecule:host-nuclease inhibitor protein gam; PDBTitle: hexagonal crystal form of gams from bacteriophage lambda. 48 c2lc0A_ not modelled 28.2 13 PDB header:protein binding Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: rv0020c_nter structure 49 d1wlza1 not modelled 27.9 14 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 50 d1b0xa_ not modelled 26.2 27 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 51 c1b0xA_ not modelled 26.2 27 PDB header:transferase Chain: A: PDB Molecule:protein (epha4 receptor tyrosine kinase); PDBTitle: the crystal structure of an eph receptor sam domain reveals2 a mechanism for modular dimerization. 52 c2remB_ not modelled 25.7 9 PDB header:oxidoreductase Chain: B: PDB Molecule:disulfide oxidoreductase; PDBTitle: crystal structure of oxidoreductase dsba from xylella2 fastidiosa 53 d1vpxa_ not modelled 24.7 33 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 54 d1v38a_ not modelled 24.7 10 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 55 d2j9ga2 not modelled 24.6 18 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 56 c1wlzD_ not modelled 24.5 14 PDB header:unknown function Chain: D: PDB Molecule:cap-binding protein complex interacting protein PDBTitle: crystal structure of djbp fragment which was obtained by2 limited proteolysis 57 c3cq0B_ not modelled 24.4 25 PDB header:transferase Chain: B: PDB Molecule:putative transaldolase ygr043c; PDBTitle: crystal structure of tal2_yeast 58 c2l98A_ not modelled 23.3 15 PDB header:contractile protein Chain: A: PDB Molecule:troponin c, slow skeletal and cardiac muscles; PDBTitle: structure of trans-resveratrol in complex with the cardiac regulatory2 protein troponin c 59 c3f10A_ not modelled 23.2 18 PDB header:hydrolase, lyase Chain: A: PDB Molecule:8-oxoguanine-dna-glycosylase; PDBTitle: crystal structure of clostridium acetobutylicum 8-2 oxoguanine dna glycosylase in complex with 8-oxoguanosine 60 d1g8ma1 not modelled 22.2 14 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Inosicase 61 c1scvA_ not modelled 21.6 16 PDB header:contractile protein, structural protein Chain: A: PDB Molecule:troponin c, slow skeletal and cardiac muscles; PDBTitle: nmr structure of the c terminal domain of cardiac troponin2 c bound to the n terminal domain of cardiac troponin i 62 c3l78A_ not modelled 21.2 11 PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159 63 d1ulza2 not modelled 20.8 21 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 64 d2e1da1 not modelled 20.2 25 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 65 c3s1vD_ not modelled 20.1 24 PDB header:transferase Chain: D: PDB Molecule:probable transaldolase; PDBTitle: transaldolase from thermoplasma acidophilum in complex with d-fructose2 6-phosphate schiff-base intermediate 66 d1pkxa1 not modelled 19.0 17 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Inosicase 67 c2b1uA_ not modelled 18.5 18 PDB header:metal binding protein Chain: A: PDB Molecule:calmodulin-like protein 5; PDBTitle: solution structure of calmodulin-like skin protein c2 terminal domain 68 c2ktgA_ not modelled 17.9 18 PDB header:ca-binding protein Chain: A: PDB Molecule:calmodulin, putative; PDBTitle: calmodulin like protein from entamoeba histolytica: solution structure2 and calcium binding properties of a partially folded protein 69 c2eaoA_ not modelled 17.7 32 PDB header:signaling protein, transferase Chain: A: PDB Molecule:ephrin type-b receptor 1; PDBTitle: solution structure of the c-terminal sam-domain of mouse2 ephrin type-b receptor 1 precursor (ec 2.7.1.112) 70 c2jziB_ not modelled 17.5 36 PDB header:metal binding protein Chain: B: PDB Molecule:serine/threonine-protein phosphatase 2b PDBTitle: structure of calmodulin complexed with the calmodulin2 binding domain of calcineurin 71 c2kdhA_ not modelled 17.1 15 PDB header:structural protein Chain: A: PDB Molecule:troponin c, slow skeletal and cardiac muscles; PDBTitle: the solution structure of human cardiac troponin c in2 complex with the green tea polyphenol; (-)-3 epigallocatechin-3-gallate 72 c1mpgB_ not modelled 16.7 22 PDB header:hydrolase Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii; PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli 73 c3senD_ not modelled 16.5 28 PDB header:signaling protein Chain: D: PDB Molecule:caskin-1; PDBTitle: structure of caskin1 tandem sams 74 c2ebuA_ not modelled 16.3 24 PDB header:replication Chain: A: PDB Molecule:replication factor c subunit 1; PDBTitle: solution structure of the brct domain from human2 replication factor c large subunit 1 75 d1wx0a1 not modelled 16.3 36 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 76 c2l05A_ not modelled 16.2 64 PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase b-raf; PDBTitle: solution nmr structure of the ras-binding domain of serine/threonine-2 protein kinase b-raf from homo sapiens, northeast structural genomics3 consortium target hr4694f 77 c2o03A_ not modelled 16.1 31 PDB header:gene regulation Chain: A: PDB Molecule:probable zinc uptake regulation protein furb; PDBTitle: crystal structure of furb from m. tuberculosis- a zinc uptake2 regulator 78 c1cjyB_ not modelled 16.0 10 PDB header:hydrolase Chain: B: PDB Molecule:protein (cytosolic phospholipase a2); PDBTitle: human cytosolic phospholipase a2 79 d2opoa1 not modelled 15.4 9 Fold:EF Hand-like Superfamily:EF-hand Family:Polcalcin 80 c2o7pA_ not modelled 14.9 31 PDB header:hydrolase, oxidoreductase Chain: A: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: the crystal structure of ribd from escherichia coli in complex with2 the oxidised nadp+ cofactor in the active site of the reductase3 domain 81 c3gidB_ not modelled 14.8 24 PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa2 carboxylase 2 (acc2) in complex with soraphen a 82 c3mwmA_ not modelled 14.7 30 PDB header:transcription Chain: A: PDB Molecule:putative metal uptake regulation protein; PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur 83 d1qjta_ not modelled 14.4 15 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 84 c1yqmA_ not modelled 14.2 15 PDB header:hydrolase/dna Chain: A: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: catalytically inactive human 8-oxoguanine glycosylase2 crosslinked to 7-deazaguanine containing dna 85 c1rrbA_ not modelled 14.2 37 PDB header:transferase Chain: A: PDB Molecule:raf proto-oncogene serine/threonine-protein PDBTitle: the ras-binding domain of raf-1 from rat, nmr, 1 structure 86 c1qzuB_ not modelled 14.0 10 PDB header:lyase Chain: B: PDB Molecule:hypothetical protein mds018; PDBTitle: crystal structure of human phosphopantothenoylcysteine decarboxylase 87 d1cjya2 not modelled 13.9 10 Fold:FabD/lysophospholipase-like Superfamily:FabD/lysophospholipase-like Family:Lysophospholipase 88 d1f54a_ not modelled 13.9 9 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 89 d1fi5a_ not modelled 13.8 17 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 90 c1fi5A_ not modelled 13.8 17 PDB header:contractile protein Chain: A: PDB Molecule:protein (troponin c); PDBTitle: nmr structure of the c terminal domain of cardiac troponin2 c bound to the n terminal domain of cardiac troponin i. 91 c1ykuB_ not modelled 13.6 9 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein pxo2-61; PDBTitle: crystal structure of a sensor domain homolog 92 c3kp9A_ not modelled 13.6 20 PDB header:blood coagulation,oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: structure of a bacterial homolog of vitamin k epoxide reductase 93 d1jc2a_ not modelled 13.5 17 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 94 c1jc2A_ not modelled 13.5 17 PDB header:structural protein Chain: A: PDB Molecule:troponin c, skeletal muscle; PDBTitle: complex of the c-domain of troponin c with residues 1-40 of2 troponin i 95 d1wrka1 not modelled 12.9 13 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 96 c3gkxB_ not modelled 12.9 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative arsc family related protein; PDBTitle: crystal structure of putative arsc family related protein from2 bacteroides fragilis 97 d1ap4a_ not modelled 12.9 12 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 98 d1qzua_ not modelled 12.9 10 Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 99 d1l7ba_ not modelled 12.9 24 Fold:BRCT domain Superfamily:BRCT domain Family:DNA ligase