PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3s1vD_

Fold library id	PDB Header	Molecule	Title
c3s1vD_	PDB header: transferase	Chain: D: PDB Molecule: probable transaldolase;	PDBTitle: transaldolase from thermoplasma acidophilum in complex with d-fructose2 6-phosphate schiff-base intermediate

Links to external resources
Added to library: Sat Aug 27 09:56:17 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K I F L D T A N I D E I R T G V N W G I V D G V T T N P T L I S K E A V N G K K Y G D I I R E I L K I V D G P V S V E V V S T K Y E G M V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E E A R K I H G L G D N A V V K I P M T E D G L R A I K T L S S E H I N T N C T L V F N P I Q A L L A A K A G V T Y V S P F V G R L D D I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S T T
S T T
S B T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E D G M Q I I D M I R T I F N N Y I I K T Q I L V A S I R N P I H V L R S A V I G A D V V T V P F N V L K S L M K H P K T D E G L A K F L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S B S
S T
S
T T

. . . . . . . . . 220 . . .

Sequence D W K K V S P D G K L I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	F	L	D	T	A	N	I	D	E	I	R	T	G	V	N	W	G	I	V	D	G	V	T	T	N	P	T	L	I	S	K	E	A	V	N	G	K	K	Y	G	D	I	I	R	E	I	L	K	I	V	D	G	P	V	S	V	E	V	V	S	T	K	Y	E	G	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T																S		T	T															S	S										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	A	R	K	I	H	G	L	G	D	N	A	V	V	K	I	P	M	T	E	D	G	L	R	A	I	K	T	L	S	S	E	H	I	N	T	N	C	T	L	V	F	N	P	I	Q	A	L	L	A	A	K	A	G	V	T	Y	V	S	P	F	V	G	R	L	D	D	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		T	T							S	S													T	T										S										T	T		S					B							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	D	G	M	Q	I	I	D	M	I	R	T	I	F	N	N	Y	I	I	K	T	Q	I	L	V	A	S	I	R	N	P	I	H	V	L	R	S	A	V	I	G	A	D	V	V	T	V	P	F	N	V	L	K	S	L	M	K	H	P	K	T	D	E	G	L	A	K	F	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																T	T			S					B	S			S											T		S												T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	D	W	K	K	V	S	P	D	G	K	L	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		T	T