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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1yqmA_

Fold library idPDB HeaderMoleculeTitle
c1yqmA_PDB header: hydrolase/dnaChain: A: PDB Molecule: n-glycosylase/dna lyase;PDBTitle: catalytically inactive human 8-oxoguanine glycosylase2 crosslinked to 7-deazaguanine containing dna


Added to library: Tue Mar 16 13:28:37 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEFGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVY
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Known secondary structure (DSSP)

SS


TTT
GGG


GGG

TTTTS
S

TTTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSCNN
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TTTTS

TT
TT






TTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence IARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGG
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Known secondary structure (DSSP) S
TT



TSTTTT
TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAWLQQLRESSYEEAHKALCILPGVGTQVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGP
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Known secondary structure (DSSP) TTSS
TTSTT

SS
TT








SS
S
SS
 .........290.........300.........310....
Sequence SPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ
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Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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