Fold library entry viewer: c1cjyB_

Added to library: Tue Mar 16 12:16:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	Y	S	H	K	F	T	V	V	V	L	R	A	T	K	V	T	K	G	A	F	G	D	M	L	D	T	P	D	P	Y	V	E	L	F	I	S	T	T	P	D	S	R	K	R	T	R	H	F	N	N	D	I	N	P	V	W	N	E	T	F	E	F	I	L	D	P	N	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S			S								S											T	T	S	S	S									T	T		S	S													T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	V	L	E	I	T	L	M	D	A	N	Y	V	M	D	E	T	L	G	T	A	T	F	T	V	S	S	M	K	V	G	E	K	K	E	V	P	F	I	F	N	Q	V	T	E	M	V	L	E	M	S	L	E	V	C	S	C	P	D	L	R	F	S	M	A	L	C	D	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	S											G	G	G	S		T	T										T	T	T														S		S	S				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	T	F	R	Q	Q	R	K	E	H	I	R	E	S	M	K	K	L	L	G	P	K	N	S	E	G	L	H	S	A	R	D	V	P	V	V	A	I	L	G	S	G	G	G	F	R	A	M	V	G	F	S	G	V	M	K	A	L	Y	E	S	G	I	L	D	C	A	T	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	S	S	T							S	S																														T		G	G	G		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	G	L	S	G	S	T	W	Y	M	S	T	L	Y	S	H	P	D	F	P	E	K	G	P	E	E	I	N	E	E	L	M	K	N	V	S	H	N	P	L	L	L	L	T	P	Q	K	V	K	R	Y	V	E	S	L	W	K	K	K	S	S	G	Q	P	V	T	F	T	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S	T	T	T	T	T	S															S		G	G	G	G																				T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	G	M	L	I	G	E	T	L	I	H	N	R	M	N	T	T	L	S	S	L	K	E	K	V	N	T	A	Q	C	P	L	P	L	F	T	C	L	H	V	K	P	D	V	S	E	L	M	F	A	D	W	V	E	F	S	P	Y	E	I	G	M	A	K	Y	G	T	F	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	T	T			S	G	G	G	G	G	G	T	T	T			S												S	S		S		G	G	G	S							S	S					G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	D	L	F	G	S	K	F	F	M	G	T	V	V	K	K	Y	E	E	N	P	L	H	F	L	M	G	V	W	G	S	A	F	S	I	L	F	N	R	V	L	G	S	T	M	E	E	E	L	E	N	I	T	T	K	H	I	V	S	W	I	H	R	M	I	M	A	L	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T	T	S				T	T																			T	T					T															T			T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	S	A	L	F	N	T	R	E	G	R	A	G	K	V	H	N	F	M	L	G	L	N	D	V	K	S	K	K	I	H	V	V	D	S	G	L	T	F	N	L	P	Y	P	L	I	L	R	P	Q	R	G	V	D	L	I	I	S	F	D	F	S	A	R	P	S	D	S	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S		T	T	S		S	S						T	T	T	T					S		S							G	G	G	T		S	S								G	G	G														S	S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	F	K	E	L	L	L	A	E	K	W	A	K	M	N	K	L	P	F	P	K	I	D	P	Y	V	F	D	R	E	G	L	K	E	C	Y	V	F	K	P	D	C	P	T	I	I	H	F	V	L	A	N	I	N	F	R	K	Y	A	P	G	V	P	R	E	T	E	E	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T								T	T							S		S																			G	G	G	G	G			T	T					S	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Sequence	E	I	A	D	F	D	I	F	D	D	P	E	S	P	F	S	T	F	N	F	Q	Y	P	N	Q	A	F	K	R	L	H	D	L	M	H	F	N	T	L	N	N	I	D	V	I	K	E	A	M	V	E	S	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				S	S	S	S	S	S		T	T		T	T																						T	T

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PDB structure

FASTA sequence

Hidden Markov model

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