PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3s6iA_

Fold library id	PDB Header	Molecule	Title
c3s6iA_	PDB header: hydrolase/dna	Chain: A: PDB Molecule: dna-3-methyladenine glycosylase 1;	PDBTitle: schizosaccaromyces pombe 3-methyladenine dna glycosylase (mag1) in2 complex with abasic-dna.

Links to external resources
Added to library: Sat Dec 17 18:01:54 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T K A E I H L S G L D E N W K R L V K L V G N Y R P N R S M E K K E P Y E E L I R A V A S Q Q L H S K A A N A I F N R F K S I S N N G Q F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S
T T T T S
S S S
T S S G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T P E E I R D M D F E I M R A C G F S A R K I D S L K S I A E A T I S G L I P T K E E A E R L S N E E L I E R L T Q I K G I G R W T V E M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T
T S S
T T S
T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . .

Sequence L I F S L N R D D V M P A D D L S I R N G Y R Y L H R L P K I P T K M Y V L K H S E I C A P F R T A A A W Y L W K T S K L A D Y T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
T T
T T
S S
G G G T T
G G G S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	A	E	I	H	L	S	G	L	D	E	N	W	K	R	L	V	K	L	V	G	N	Y	R	P	N	R	S	M	E	K	K	E	P	Y	E	E	L	I	R	A	V	A	S	Q	Q	L	H	S	K	A	A	N	A	I	F	N	R	F	K	S	I	S	N	N	G	Q	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S													S						T	T	T	T	S													S	S	S														T	S	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	P	E	E	I	R	D	M	D	F	E	I	M	R	A	C	G	F	S	A	R	K	I	D	S	L	K	S	I	A	E	A	T	I	S	G	L	I	P	T	K	E	E	A	E	R	L	S	N	E	E	L	I	E	R	L	T	Q	I	K	G	I	G	R	W	T	V	E	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S									T																			T	S	S							T	T	S										T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Sequence	L	I	F	S	L	N	R	D	D	V	M	P	A	D	D	L	S	I	R	N	G	Y	R	Y	L	H	R	L	P	K	I	P	T	K	M	Y	V	L	K	H	S	E	I	C	A	P	F	R	T	A	A	A	W	Y	L	W	K	T	S	K	L	A	D	Y	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S			S	S				T	T												T	T		S	S												G	G	G	T	T												G	G	G	S	T	T