Email l.a.kelley@imperial.ac.uk Description Q9JMR6 Date Thu Jan 5 12:37:50 GMT 2012 Unique Job ID 6e7a4450c3df15c1

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3h16A_ 97.4 18 PDB header:signaling protein Chain: A: PDB Molecule:tir protein; PDBTitle: crystal structure of a bacteria tir domain, pdtir from2 paracoccus denitrificans 2 d1fyva_ 97.2 16 Fold:Flavodoxin-like Superfamily:Toll/Interleukin receptor TIR domain Family:Toll/Interleukin receptor TIR domain 3 c2y92A_ 97.0 17 PDB header:immune system Chain: A: PDB Molecule:toll/interleukin-1 receptor domain-containing adapter PDBTitle: crystal structure of mal adaptor protein 4 c2z5vA_ 97.0 12 PDB header:immune system Chain: A: PDB Molecule:myeloid differentiation primary response protein PDBTitle: solution structure of the tir domain of human myd88 5 c1t3gB_ 95.9 15 PDB header:membrane protein Chain: B: PDB Molecule:x-linked interleukin-1 receptor accessory PDBTitle: crystal structure of the toll/interleukin-1 receptor (tir)2 domain of human il-1rapl 6 d1fyxa_ 95.0 10 Fold:Flavodoxin-like Superfamily:Toll/Interleukin receptor TIR domain Family:Toll/Interleukin receptor TIR domain 7 c3oziB_ 94.2 5 PDB header:plant protein Chain: B: PDB Molecule:l6tr; PDBTitle: crystal structure of the tir domain from the flax disease resistance2 protein l6 8 d2f62a1 84.9 16 Fold:Flavodoxin-like Superfamily:N-(deoxy)ribosyltransferase-like Family:N-deoxyribosyltransferase 9 d1m1nb_ 84.3 19 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 10 c2khzB_ 82.7 24 PDB header:nuclear protein Chain: B: PDB Molecule:c-myc-responsive protein rcl; PDBTitle: solution structure of rcl 11 c2i34B_ 77.0 15 PDB header:hydrolase Chain: B: PDB Molecule:acid phosphatase; PDBTitle: the crystal structure of class c acid phosphatase from bacillus2 anthracis with tungstate bound 12 d1qh8b_ 76.0 13 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 13 d1miob_ 60.4 18 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 14 d1wdka3 50.4 16 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 15 c3pdiB_ 47.5 12 PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen 16 d2i7xa1 46.3 17 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 17 c2i7xA_ 46.3 17 PDB header:rna binding protein, protein binding Chain: A: PDB Molecule:protein cft2; PDBTitle: structure of yeast cpsf-100 (ydh1p) 18 c3pdiG_ 45.7 7 PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen 19 c3kbqA_ 43.4 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ta0487; PDBTitle: the crystal structure of the protein cina with unknown function from2 thermoplasma acidophilum 20 c2xr1B_ 43.3 15 PDB header:hydrolase Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 100 kd PDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei 21 c3jrnA_ not modelled 39.2 13 PDB header:plant protein Chain: A: PDB Molecule:at1g72930 protein; PDBTitle: crystal structure of tir domain from arabidopsis thaliana 22 d2d81a1 not modelled 39.2 13 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:PHB depolymerase-like 23 c2ycbA_ not modelled 38.7 22 PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor; PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus 24 d1jq5a_ not modelled 36.8 14 Fold:Dehydroquinate synthase-like Superfamily:Dehydroquinate synthase-like Family:Iron-containing alcohol dehydrogenase 25 c3sirD_ not modelled 34.6 20 PDB header:hydrolase Chain: D: PDB Molecule:caspase; PDBTitle: crystal structure of drice 26 c3ox4D_ not modelled 33.9 15 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 2; PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor 27 d2dkfa1 not modelled 33.6 19 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:beta-CASP RNA-metabolising hydrolases 28 c3et4A_ not modelled 32.5 20 PDB header:hydrolase Chain: A: PDB Molecule:outer membrane protein p4, nadp phosphatase; PDBTitle: structure of recombinant haemophilus influenzae e(p4) acid phosphatase 29 c2xr1A_ not modelled 31.9 15 PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor 100 kd PDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei 30 d1ycga1 not modelled 30.9 16 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 31 d2i52a1 not modelled 30.6 27 Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like 32 d2ieca1 not modelled 30.0 27 Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like 33 c2ogfD_ not modelled 29.5 33 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein mj0408; PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372 34 d2obba1 not modelled 27.3 11 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 35 d1u0sy_ not modelled 26.1 11 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 36 c3pctA_ not modelled 25.3 15 PDB header:hydrolase Chain: A: PDB Molecule:class c acid phosphatase; PDBTitle: structure of the class c acid phosphatase from pasteurella multocida 37 c2ia5C_ not modelled 23.6 21 PDB header:transferase Chain: C: PDB Molecule:polynucleotide kinase; PDBTitle: t4 polynucleotide kinase/phosphatase with bound sulfate and2 magnesium. 38 d1ltqa1 not modelled 23.3 21 Fold:HAD-like Superfamily:HAD-like Family:phosphatase domain of polynucleotide kinase 39 d2b82a1 not modelled 22.4 19 Fold:HAD-like Superfamily:HAD-like Family:Class B acid phosphatase, AphA 40 c1tjnA_ not modelled 22.3 18 PDB header:lyase Chain: A: PDB Molecule:sirohydrochlorin cobaltochelatase; PDBTitle: crystal structure of hypothetical protein af0721 from archaeoglobus2 fulgidus 41 d1tjna_ not modelled 22.3 18 Fold:Chelatase-like Superfamily:Chelatase Family:CbiX-like 42 c3ehdA_ not modelled 21.5 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein; PDBTitle: crystal structure of conserved protein from enterococcus faecalis v583 43 d1uxoa_ not modelled 21.1 13 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:YdeN-like 44 c3af5A_ not modelled 20.9 27 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ph1404; PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii 45 c2ofhX_ not modelled 20.0 17 PDB header:hydrolase, membrane protein Chain: X: PDB Molecule:zinc-transporting atpase; PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form 46 c2xdqB_ not modelled 19.6 10 PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex 47 c2kbzA_ not modelled 18.9 25 PDB header:viral protein Chain: A: PDB Molecule:15 protein (bacteriophage spp1 complete PDBTitle: nmr structure of protein gp15 of bacteriophage spp1 48 d1f8ya_ not modelled 17.1 21 Fold:Flavodoxin-like Superfamily:N-(deoxy)ribosyltransferase-like Family:N-deoxyribosyltransferase 49 d1vh3a_ not modelled 17.0 16 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase 50 c3bfjK_ not modelled 17.0 19 PDB header:oxidoreductase Chain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase 51 c3lyhB_ not modelled 16.8 11 PDB header:lyase Chain: B: PDB Molecule:cobalamin (vitamin b12) biosynthesis cbix protein; PDBTitle: crystal structure of putative cobalamin (vitamin b12) biosynthesis2 cbix protein (yp_958415.1) from marinobacter aquaeolei vt8 at 1.60 a3 resolution 52 d2d9ia1 not modelled 16.3 5 Fold:IF3-like Superfamily:SMR domain-like Family:Smr domain 53 d1vlja_ not modelled 15.9 17 Fold:Dehydroquinate synthase-like Superfamily:Dehydroquinate synthase-like Family:Iron-containing alcohol dehydrogenase 54 d1kija1 not modelled 15.7 8 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:DNA gyrase/MutL, second domain 55 d2i76a2 not modelled 15.6 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 56 d1xi8a3 not modelled 15.4 17 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 57 d1ssqa_ not modelled 15.4 11 Fold:Single-stranded left-handed beta-helix Superfamily:Trimeric LpxA-like enzymes Family:Serine acetyltransferase 58 c1htjF_ not modelled 15.3 22 PDB header:signaling protein Chain: F: PDB Molecule:kiaa0380; PDBTitle: structure of the rgs-like domain from pdz-rhogef 59 d1htjf_ not modelled 15.3 22 Fold:Regulator of G-protein signaling, RGS Superfamily:Regulator of G-protein signaling, RGS Family:Regulator of G-protein signaling, RGS 60 d2fcja1 not modelled 15.3 20 Fold:Toprim domain Superfamily:Toprim domain Family:Toprim domain 61 c2v0xB_ not modelled 15.2 19 PDB header:cell cycle Chain: B: PDB Molecule:lamina-associated polypeptide 2 isoforms PDBTitle: the dimerization domain of lap2alpha 62 c2l3mA_ not modelled 14.8 10 PDB header:metal binding protein Chain: A: PDB Molecule:copper-ion-binding protein; PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames 63 c3nohA_ not modelled 14.4 29 PDB header:peptide binding protein Chain: A: PDB Molecule:putative peptide binding protein; PDBTitle: crystal structure of a putative peptide binding protein (rumgna_00914)2 from ruminococcus gnavus atcc 29149 at 1.60 a resolution 64 d2cpqa1 not modelled 14.3 35 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 65 d2hk6a1 not modelled 14.1 14 Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase 66 c1wqaB_ not modelled 13.7 13 PDB header:isomerase Chain: B: PDB Molecule:phospho-sugar mutase; PDBTitle: crystal structure of pyrococcus horikoshii2 phosphomannomutase/phosphoglucomutase complexed with mg2+ 67 c3u0vA_ not modelled 13.7 11 PDB header:hydrolase Chain: A: PDB Molecule:lysophospholipase-like protein 1; PDBTitle: crystal structure analysis of human lyplal1 68 d1q8la_ not modelled 13.3 7 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 69 d2hiya1 not modelled 13.2 6 Fold:SP0830-like Superfamily:SP0830-like Family:SP0830-like 70 c2k29A_ not modelled 13.1 11 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 71 c2rafC_ not modelled 13.1 22 PDB header:oxidoreductase Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase; PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution 72 d1e5da1 not modelled 13.0 17 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related 73 c3gx1A_ not modelled 12.9 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin1832 protein; PDBTitle: crystal structure of a domain of lin1832 from listeria innocua 74 c3nhzA_ not modelled 12.8 17 PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra 75 d1s6ua_ not modelled 12.6 11 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 76 d1cvra1 not modelled 12.6 22 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Gingipain R (RgpB), C-terminal domain 77 c2j48A_ not modelled 12.4 14 PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein. 78 c3cf4A_ not modelled 12.3 16 PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 79 d1afia_ not modelled 12.3 6 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 80 c3clhA_ not modelled 12.2 7 PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of 3-dehydroquinate synthase (dhqs)from2 helicobacter pylori 81 c2vq3B_ not modelled 12.1 13 PDB header:oxidoreductase Chain: B: PDB Molecule:metalloreductase steap3; PDBTitle: crystal structure of the membrane proximal oxidoreductase2 domain of human steap3, the dominant ferric reductase of3 the erythroid transferrin cycle 82 d1mioa_ not modelled 12.0 11 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 83 d1kvja_ not modelled 11.9 9 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 84 d1l8qa2 not modelled 11.5 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 85 c3okfA_ not modelled 11.4 17 PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase2 (arob) from vibrio cholerae 86 c2r98A_ not modelled 11.3 16 PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae 87 c3trdA_ not modelled 11.2 14 PDB header:hydrolase Chain: A: PDB Molecule:alpha/beta hydrolase; PDBTitle: structure of an alpha-beta serine hydrolase homologue from coxiella2 burnetii 88 d1p6ta1 not modelled 11.2 7 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 89 d1bxca_ not modelled 11.2 15 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 90 c2yvqA_ not modelled 11.1 15 PDB header:ligase Chain: A: PDB Molecule:carbamoyl-phosphate synthase; PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens 91 d1p9oa_ not modelled 11.0 19 Fold:Ribokinase-like Superfamily:CoaB-like Family:CoaB-like 92 d1zesa1 not modelled 10.9 18 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 93 d1wu2a3 not modelled 10.7 18 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 94 d1w25a1 not modelled 10.4 16 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 95 c3qd7X_ not modelled 10.3 25 PDB header:hydrolase Chain: X: PDB Molecule:uncharacterized protein ydal; PDBTitle: crystal structure of ydal, a stand-alone small muts-related protein2 from escherichia coli 96 d2auna2 not modelled 10.2 10 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:LD-carboxypeptidase A N-terminal domain-like 97 c2ldiA_ not modelled 10.2 17 PDB header:hydrolase Chain: A: PDB Molecule:zinc-transporting atpase; PDBTitle: nmr solution structure of ziaan sub mutant 98 d1qh8a_ not modelled 10.1 9 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 99 d1mb3a_ not modelled 10.0 18 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related