Fold library entry viewer: c3af5A_

Added to library: Sat Aug 28 23:56:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	Q	V	D	Q	I	L	R	D	I	R	A	V	V	N	Q	M	V	P	K	E	A	K	I	T	E	I	E	F	E	G	P	E	L	V	I	Y	V	K	N	P	E	G	E	L	I	K	D	L	A	K	V	L	K	K	R	I	S	V	R	P	D	P	E	V	L	L	P	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	S		T	T	S									S	S	S						S	S					S									T	S								G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	A	E	K	L	I	F	E	I	V	P	K	E	A	E	I	T	N	I	A	F	D	P	S	V	G	E	V	L	I	E	A	K	K	P	G	L	V	I	G	K	N	G	E	T	L	R	L	I	T	Q	K	V	K	W	A	P	K	V	V	R	T	P	P	L	Q	S	Q	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S		G	G	G									T	T	T	T							S	S	T	T	T	T	S		T	T	S												S									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	S	I	R	Q	I	L	Q	T	E	S	K	D	R	R	K	F	L	R	Q	V	G	R	N	I	Y	R	K	P	E	Y	K	S	R	W	I	R	I	T	G	L	G	G	F	R	E	V	G	R	S	A	L	L	V	Q	T	D	E	S	F	V	L	V	D	F	G	V	N	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	S	S	S					S										S	S	S	S	S									S	S											G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	L	N	D	P	Y	K	A	F	P	H	F	D	A	P	E	F	Q	Y	V	L	R	E	G	L	L	D	A	I	I	I	T	H	A	H	L	D	H	C	G	M	L	P	Y	L	F	R	Y	N	L	F	D	G	P	I	Y	T	T	P	P	T	R	D	L	M	V	L	L	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T						S			T	T										T	T								S		S	S					T	T							T	T				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	F	I	E	I	Q	Q	S	N	G	Q	D	P	L	Y	R	P	R	D	I	K	E	V	I	K	H	T	I	T	L	D	Y	G	E	V	R	D	I	S	P	D	I	R	L	T	L	H	N	A	G	H	I	L	G	S	A	I	V	H	L	H	I	G	N	G	L	H	N	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T				S	S											T						T	T							T	T									S	S	S	T	T									T	T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	T	G	D	F	K	F	I	P	T	R	L	L	E	P	A	N	A	K	F	P	R	L	E	T	L	V	M	E	S	T	Y	G	G	A	N	D	I	Q	M	P	R	E	E	A	E	K	R	L	I	E	V	I	H	N	T	I	K	R	G	G	K	V	L	I	P	A	M	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				S			S	S							B		S	S		S							T	T		S	T	T																							T	T									T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	R	A	Q	E	V	M	M	V	L	E	E	Y	A	R	I	G	G	I	E	V	P	I	Y	L	D	G	M	I	W	E	A	T	A	I	H	T	A	Y	P	E	Y	L	S	R	R	L	R	E	Q	I	F	K	E	G	Y	N	P	F	L	S	E	I	F	H	P	V	A	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														T	T	T				S						S	S										T		G	G	G	S								T	T	T	S	S			S	T	T		T	T						S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	E	R	Q	D	I	I	D	S	N	E	P	A	I	I	I	A	S	S	G	M	L	V	G	G	P	S	V	E	Y	F	K	Q	L	A	P	D	P	K	N	S	I	I	F	V	S	Y	Q	A	E	G	T	L	G	R	Q	V	Q	S	G	I	R	E	I	P	M	V	G	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S							S		T	T	S	S	S	S										T	T		T	T							S				T	T									T		S							G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	R	T	E	V	I	K	V	N	M	E	V	H	T	I	D	G	F	S	G	H	A	D	R	R	E	L	M	N	Y	V	A	K	V	R	P	R	P	E	R	I	I	T	V	H	G	E	P	Q	K	C	L	D	L	A	T	S	I	H	R	K	F	G	I	S	T	R	A	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G									S						G	G	G		S	S														B	S			S						S	S
	.	.	.	.	.	.	.	.
Sequence	N	L	D	T	I	R	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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