PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ox4D_

Fold library id	PDB Header	Molecule	Title
c3ox4D_	PDB header: oxidoreductase	Chain: D: PDB Molecule: alcohol dehydrogenase 2;	PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor

Links to external resources
Added to library: Sat Feb 19 08:46:08 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A S S T F Y I P F V N E M G E G S L E K A I K D L N G S G F K N A L I V S D A F M N K S G V V K Q V A D L L K A Q G I N S A V Y D G V M P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T T T T S
T T T T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P T V T A V L E G L K I L K D N N S D F V I S L G G G S P H D C A K A I A L V A T N G G E V K D Y E G I D K S K K P A L P L M S I N T T A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T
S
S
S G G G
S
S S
S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T A S E M T R F C I I T D E V R H V K M A I V D R H V T P M V S V N D P L L M V G M P K G L T A A T G M D A L T H A F E A Y S S T A A T P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S S S S S
G G G S
S
G G G T T T
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence T D A C A L K A A S M I A K N L K T A C D N G K D M P A R E A M A Y A Q F L A G M A F N N A S L G Y V H A M A H Q L G G Y Y N L P H G V C N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A V L L P H V L A Y N A S V V A G R L K D V G V A M G L D I A N L G D K E G A E A T I Q A V R D L A A S I G I P A N L T E L G A K K E D V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S S
T T
S S T
G G G

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . .

Sequence L L A D H A L K D A C A L T N P R Q G D Q K E V E E L F L S A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S G G G G G
S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	S	T	F	Y	I	P	F	V	N	E	M	G	E	G	S	L	E	K	A	I	K	D	L	N	G	S	G	F	K	N	A	L	I	V	S	D	A	F	M	N	K	S	G	V	V	K	Q	V	A	D	L	L	K	A	Q	G	I	N	S	A	V	Y	D	G	V	M	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S					S	T	T								T	T	T	T	S																T	T											T	T	T											S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	T	V	T	A	V	L	E	G	L	K	I	L	K	D	N	N	S	D	F	V	I	S	L	G	G	G	S	P	H	D	C	A	K	A	I	A	L	V	A	T	N	G	G	E	V	K	D	Y	E	G	I	D	K	S	K	K	P	A	L	P	L	M	S	I	N	T	T	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B														T	T									S																		S		S	G	G	G				S			S	S			S								S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	A	S	E	M	T	R	F	C	I	I	T	D	E	V	R	H	V	K	M	A	I	V	D	R	H	V	T	P	M	V	S	V	N	D	P	L	L	M	V	G	M	P	K	G	L	T	A	A	T	G	M	D	A	L	T	H	A	F	E	A	Y	S	S	T	A	A	T	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		S							S	S	S	S	S							G	G	G	S		S						G	G	G	T	T	T																							S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	D	A	C	A	L	K	A	A	S	M	I	A	K	N	L	K	T	A	C	D	N	G	K	D	M	P	A	R	E	A	M	A	Y	A	Q	F	L	A	G	M	A	F	N	N	A	S	L	G	Y	V	H	A	M	A	H	Q	L	G	G	Y	Y	N	L	P	H	G	V	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	V	L	L	P	H	V	L	A	Y	N	A	S	V	V	A	G	R	L	K	D	V	G	V	A	M	G	L	D	I	A	N	L	G	D	K	E	G	A	E	A	T	I	Q	A	V	R	D	L	A	A	S	I	G	I	P	A	N	L	T	E	L	G	A	K	K	E	D	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T		S		S	S	S																				T	T			S	S					T			G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Sequence	L	L	A	D	H	A	L	K	D	A	C	A	L	T	N	P	R	Q	G	D	Q	K	E	V	E	E	L	F	L	S	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	G	G	G	G	G		S	S														T