Fold library entry viewer: d1vlja_

Added to library: Tue Mar 16 13:23:44 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	H	M	E	N	F	V	F	H	N	P	T	K	I	V	F	G	R	G	T	I	P	K	I	G	E	E	I	K	N	A	G	I	R	K	V	L	F	L	Y	G	G	G	S	I	K	K	N	G	V	Y	D	Q	V	V	D	S	L	K	K	H	G	I	E	W	V	E	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	T	T		G	G	G								T	T										S	S					S	S												T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	K	P	N	P	V	L	S	K	V	H	E	A	V	E	V	A	K	K	E	K	V	E	A	V	L	G	V	G	G	G	S	V	V	D	S	A	K	A	V	A	A	G	A	L	Y	E	G	D	I	W	D	A	F	I	G	K	Y	Q	I	E	K	A	L	P	I	F	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		B														T	T		S							S														T	T		S	S		G	G	G	G	G	G	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	T	I	S	A	T	G	T	E	M	N	G	N	A	V	I	T	N	E	K	T	K	E	K	Y	G	V	S	S	K	A	L	Y	P	K	V	S	I	I	D	P	S	V	Q	F	T	L	P	K	E	Q	T	V	Y	G	A	V	D	A	I	S	H	I	L	E	Y	Y	F	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S		G	G	G	S	S							T	T	T	T								G	G	G	S		S						G	G	G	G	G	G	S																					T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	S	P	E	I	S	N	E	I	A	E	G	T	I	R	T	I	M	K	M	T	E	R	L	I	E	K	P	D	D	Y	E	A	R	A	N	L	A	W	S	A	T	I	A	L	N	G	T	M	A	V	G	R	R	G	G	E	W	A	C	H	R	I	E	H	S	L	S	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T	T																T	S	S	T	T	T	T	T	S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	D	I	A	H	G	A	G	L	A	I	V	F	P	A	W	M	K	Y	V	Y	R	K	N	P	A	Q	F	E	R	F	A	K	K	I	F	G	F	E	G	E	G	E	E	L	I	L	K	G	I	E	A	F	K	N	W	L	K	K	V	G	A	P	V	S	L	K	D	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G	S																																				T	T				S	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Sequence	I	P	E	E	D	I	D	K	I	V	D	N	V	M	L	L	V	E	K	N	L	K	P	K	G	A	S	L	G	R	I	M	V	L	E	R	E	D	V	R	E	I	L	K	L	A	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G															T	T	G	G	G	T			S		S	S	S														T	T

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PDB structure

FASTA sequence

Hidden Markov model

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