Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	S	W	I	E	R	I	K	S	N	I	T	P	T	R	K	A	S	I	P	E	G	V	W	T	K	C	D	S	C	G	Q	V	L	Y	R	A	E	L	E	R	N	L	E	V	C	P	K	C	D	H	H	M	R	M	T	A	R	N	R
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?																											?							?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		L	H	S	L	L	D	E	G	S	L	V	E	L	G	S	E	L	E	P	K	D	V	L	K	F	R	D	S	K	K	Y	K	D	R	L	A	S	A	Q	K	E	T	G	E	K	D	A	L	V	V	M	K	G	T	L	Y	G	M	P	V
Secondary structure
SS confidence
Disorder																		?																				?				?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		V	A	A	A	F	E	F	A	F	M	G	G	S	M	G	S	V	V	G	A	R	F	V	R	A	V	E	Q	A	L	E	D	N	C	P	L	I	C	F	S	A	S	G	G	A	R	M	Q	E	A	L	M	S	L	M	Q	M	A	K	T
Secondary structure
SS confidence
Disorder																																													?			?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		S	A	A	L	A	K	M	Q	E	R	G	L	P	Y	I	S	V	L	T	D	P	T	M	G	G	V	S	A	S	F	A	M	L	G	D	L	N	I	A	E	P	K	A	L	I	G	F	A	G	P	R	V	I	E	Q	T	V	R	E	K
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		L	P	P	G	F	Q	R	S	E	F	L	I	E	K	G	A	I	D	M	I	V	R	R	P	E	M	R	L	K	L	A	S	I	L	A	K	L	M	N	L	P	A	P	N	P	E	A	P	R	E	G	V	V	V	P	P	V	P	D	Q
Secondary structure
SS confidence
Disorder			?	?	?	?	?	?																																					?	?	?	?	?	?	?	?	?	?	?				?	?	?
Disorder confidence
		.	.	.	.
Sequence		E	P	E	A
Secondary structure
SS confidence
Disorder		?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2f9i chain D Region: 23 - 280 Aligned: 255 Modelled: 258 Confidence: 100.0% Identity: 49% PDB header:transferase Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus Phyre2 PDB 2f9y chain B Region: 23 - 285 Aligned: 257 Modelled: 263 Confidence: 100.0% Identity: 100% PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli Phyre2 PDB 2f9y chain B domain 1 Region: 23 - 285 Aligned: 257 Modelled: 263 Confidence: 100.0% Identity: 100% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 1on3 chain E Region: 54 - 301 Aligned: 232 Modelled: 236 Confidence: 100.0% Identity: 33% PDB header:transferase Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound) Phyre2 PDB 1xnw chain D Region: 54 - 298 Aligned: 230 Modelled: 233 Confidence: 100.0% Identity: 26% PDB header:ligase Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit; PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i Phyre2 PDB 3n6r chain F Region: 54 - 303 Aligned: 235 Modelled: 237 Confidence: 100.0% Identity: 25% PDB header:ligase Chain: F: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) Phyre2 PDB 1x0u chain B Region: 54 - 303 Aligned: 235 Modelled: 238 Confidence: 100.0% Identity: 25% PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii Phyre2 PDB 1xny chain A domain 1 Region: 54 - 289 Aligned: 221 Modelled: 236 Confidence: 100.0% Identity: 27% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 2a7s chain D Region: 54 - 301 Aligned: 233 Modelled: 236 Confidence: 100.0% Identity: 25% PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis Phyre2 PDB 1vrg chain A domain 1 Region: 54 - 284 Aligned: 216 Modelled: 231 Confidence: 100.0% Identity: 25% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 2a7s chain A domain 1 Region: 54 - 287 Aligned: 219 Modelled: 222 Confidence: 100.0% Identity: 26% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 1on3 chain A domain 1 Region: 54 - 284 Aligned: 215 Modelled: 219 Confidence: 100.0% Identity: 34% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 1vrg chain E Region: 54 - 301 Aligned: 233 Modelled: 248 Confidence: 100.0% Identity: 24% PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution Phyre2 PDB 3u9r chain B Region: 54 - 301 Aligned: 229 Modelled: 231 Confidence: 100.0% Identity: 22% PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit Phyre2 PDB 1pix chain B Region: 54 - 301 Aligned: 226 Modelled: 229 Confidence: 100.0% Identity: 20% PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase Phyre2 PDB 3glm chain D Region: 54 - 302 Aligned: 227 Modelled: 230 Confidence: 100.0% Identity: 19% PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa Phyre2 PDB 1pix chain A domain 2 Region: 51 - 281 Aligned: 209 Modelled: 212 Confidence: 100.0% Identity: 20% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 1vrg chain A domain 2 Region: 43 - 295 Aligned: 223 Modelled: 226 Confidence: 100.0% Identity: 20% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 1on3 chain A domain 2 Region: 43 - 295 Aligned: 223 Modelled: 226 Confidence: 100.0% Identity: 22% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 1xny chain A domain 2 Region: 37 - 288 Aligned: 224 Modelled: 225 Confidence: 100.0% Identity: 20% Fold: ClpP/crotonase Superfamily: ClpP/crotonase Family: Biotin dependent carboxylase carboxyltransferase domain Phyre2 PDB 2zjr chain Z domain 1 Region: 8 - 52 Aligned: 37 Modelled: 37 Confidence: 89.6% Identity: 19% Fold: Rubredoxin-like Superfamily: Zn-binding ribosomal proteins Family: Ribosomal protein L32p Phyre2 PDB 2ct7 chain A domain 1 Region: 2 - 53 Aligned: 46 Modelled: 46 Confidence: 87.0% Identity: 17% Fold: RING/U-box Superfamily: RING/U-box Family: IBR domain Phyre2 1 c2f9iD_ 2 c2f9yB_ 3 d2f9yb1 4 c1on3E_ 5 c1xnwD_ 6 c3n6rF_ 7 c1x0uB_ 8 d1xnya1 9 c2a7sD_ 10 d1vrga1 11 d2a7sa1 12 d1on3a1 13 c1vrgE_ 14 c3u9rB_ 15 c1pixB_ 16 c3glmD_ 17 d1pixa2 18 d1vrga2 19 d1on3a2 20 d1xnya2 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 d2zjrz1 124 125 126 127 d2ct7a1 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2f9iD_ 100.0 49 PDB header:transferase Chain: D: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 2 c2f9yB_ 100.0 100 PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli 3 d2f9yb1 100.0 100 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 4 c1on3E_ 100.0 33 PDB header:transferase Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound) 5 c1xnwD_ 100.0 26 PDB header:ligase Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit; PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i 6 c3n6rF_ 100.0 25 PDB header:ligase Chain: F: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) 7 c1x0uB_ 100.0 25 PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii 8 d1xnya1 100.0 27 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 9 c2a7sD_ 100.0 25 PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis 10 d1vrga1 100.0 25 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 11 d2a7sa1 100.0 26 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 12 d1on3a1 100.0 34 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 13 c1vrgE_ 100.0 24 PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution 14 c3u9rB_ 100.0 22 PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit 15 c1pixB_ 100.0 20 PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase 16 c3glmD_ 100.0 19 PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa 17 d1pixa2 100.0 20 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 18 d1vrga2 100.0 20 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 19 d1on3a2 100.0 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 20 d1xnya2 100.0 20 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 21 d2a7sa2 not modelled 100.0 21 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 22 c1od4C_ not modelled 100.0 17 PDB header:ligase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain 23 d1pixa3 not modelled 100.0 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 24 c3h0jA_ not modelled 100.0 20 PDB header:transferase Chain: A: PDB Molecule:acetyl-coa carboxylase; PDBTitle: crystal structure of the carboxyltransferase domain of2 acetyl-coenzyme a carboxylase in complex with compound 2 25 c3ff6D_ not modelled 100.0 21 PDB header:ligase Chain: D: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: human acc2 ct domain with cp-640186 26 c2x24B_ not modelled 100.0 19 PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase; PDBTitle: bovine acc2 ct domain in complex with inhibitor 27 c1uytC_ not modelled 100.0 20 PDB header:transferase Chain: C: PDB Molecule:acetyl-coa carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain 28 d2f9ya1 not modelled 100.0 22 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 29 d1uyra1 not modelled 100.0 19 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 30 c2f9iC_ not modelled 100.0 18 PDB header:transferase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 31 d1uyra2 not modelled 99.8 25 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 32 d1q52a_ not modelled 98.7 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 33 c3r6hA_ not modelled 98.7 13 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa3; PDBTitle: crystal structure of an enoyl-coa hydratase (echa3) from mycobacterium2 marinum 34 c3isaA_ not modelled 98.7 12 PDB header:hydrolase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of putative enoyl-coa hydratase/isomerase from2 bordetella parapertussis 35 c2vx2D_ not modelled 98.7 15 PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase domain-containing protein 3; PDBTitle: crystal structure of human enoyl coenzyme a hydratase2 domain-containing protein 3 (echdc3) 36 c2f6qA_ not modelled 98.7 15 PDB header:isomerase Chain: A: PDB Molecule:peroxisomal 3,2-trans-enoyl-coa isomerase; PDBTitle: the crystal structure of human peroxisomal delta3, delta2 enoyl coa2 isomerase (peci) 37 c2q35A_ not modelled 98.6 14 PDB header:lyase Chain: A: PDB Molecule:curf; PDBTitle: crystal structure of the y82f variant of ech2 decarboxylase domain of2 curf from lyngbya majuscula 38 c3i47A_ not modelled 98.6 16 PDB header:lyase Chain: A: PDB Molecule:enoyl coa hydratase/isomerase (crotonase); PDBTitle: crystal structure of putative enoyl coa hydratase/isomerase2 (crotonase) from legionella pneumophila subsp. pneumophila str.3 philadelphia 1 39 d2a7ka1 not modelled 98.6 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 40 d2f6qa1 not modelled 98.6 14 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 41 c3moyA_ not modelled 98.6 21 PDB header:lyase Chain: A: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of probable enoyl-coa hydratase from mycobacterium2 smegmatis 42 d1uiya_ not modelled 98.6 12 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 43 c3njbA_ not modelled 98.6 18 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium smegmatis,2 iodide soak 44 c2qq3F_ not modelled 98.6 20 PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase subunit i; PDBTitle: crystal structure of enoyl-coa hydrates subunit i (gk_2039)2 other form from geobacillus kaustophilus hta426 45 c2fbmB_ not modelled 98.6 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:y chromosome chromodomain protein 1, telomeric isoform b; PDBTitle: acetyltransferase domain of cdy1 46 d1nzya_ not modelled 98.5 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 47 d2fw2a1 not modelled 98.5 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 48 c3mybA_ not modelled 98.5 16 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase mycobacterium smegmatis 49 c3omeE_ not modelled 98.5 15 PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of a probable enoyl-coa hydratase from mycobacterium2 smegmatis 50 c3peaD_ not modelled 98.5 14 PDB header:isomerase Chain: D: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus anthracis str.2 'ames ancestor' 51 c2ej5B_ not modelled 98.5 15 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii; PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus 52 d1ef8a_ not modelled 98.5 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 53 c3q1tB_ not modelled 98.5 18 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium avium 54 d1wz8a1 not modelled 98.5 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 55 c2iexA_ not modelled 98.5 18 PDB header:lyase Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase; PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426 56 c3kqfC_ not modelled 98.4 16 PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: 1.8 angstrom resolution crystal structure of enoyl-coa hydratase from2 bacillus anthracis. 57 d1xx4a_ not modelled 98.4 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 58 c3hrxD_ not modelled 98.4 18 PDB header:lyase Chain: D: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of phenylacetic acid degradation protein paag 59 c2j5iF_ not modelled 98.4 15 PDB header:lyase Chain: F: PDB Molecule:p-hydroxycinnamoyl coa hydratase/lyase; PDBTitle: crystal structure of hydroxycinnamoyl-coa hydratase-lyase 60 c3rsiA_ not modelled 98.4 16 PDB header:isomerase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: the structure of a putative enoyl-coa hydratase/isomerase from2 mycobacterium abscessus atcc 19977 / dsm 44196 61 c3lkeA_ not modelled 98.4 14 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydratase from bacillus2 halodurans 62 c2hw5F_ not modelled 98.4 15 PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase; PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1 63 c3p5mB_ not modelled 98.4 16 PDB header:isomerase Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium 64 c3h81A_ not modelled 98.4 19 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa8; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis 65 c3qmjA_ not modelled 98.4 14 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa8_6; PDBTitle: crystal structure of enoyl-coa hydratase echa8_6 from mycobacterium2 marinum 66 c3hinA_ not modelled 98.4 14 PDB header:lyase Chain: A: PDB Molecule:putative 3-hydroxybutyryl-coa dehydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from2 rhodopseudomonas palustris cga009 67 c3h02F_ not modelled 98.3 15 PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. 68 d1rjma_ not modelled 98.3 13 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 69 c3g64A_ not modelled 98.3 15 PDB header:lyase Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of putative enoyl-coa hydratase from streptomyces2 coelicolor a3(2) 70 c3l3sF_ not modelled 98.3 17 PDB header:isomerase Chain: F: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydrotase/isomerase family2 protein from silicibacter pomeroyi 71 c3rrvC_ not modelled 98.3 12 PDB header:isomerase Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium paratuberculosis 72 c3ot6A_ not modelled 98.3 17 PDB header:isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase family protein2 from psudomonas syringae 73 d1dcia_ not modelled 98.3 11 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 74 c2ppyE_ not modelled 98.3 19 PDB header:lyase Chain: E: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of enoyl-coa hydrates (gk_1992) from geobacillus2 kaustophilus hta426 75 c3bptA_ not modelled 98.3 15 PDB header:hydrolase Chain: A: PDB Molecule:3-hydroxyisobutyryl-coa hydrolase; PDBTitle: crystal structure of human beta-hydroxyisobutyryl-coa hydrolase in2 complex with quercetin 76 d1mj3a_ not modelled 98.2 19 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 77 d1hzda_ not modelled 98.2 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 78 c3sllC_ not modelled 98.2 16 PDB header:isomerase Chain: C: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 79 c3ju1A_ not modelled 98.2 11 PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein; PDBTitle: crystal structure of enoyl-coa hydratase/isomerase family protein 80 c3oc7A_ not modelled 98.2 16 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure of an enoyl-coa hydratase from mycobacterium avium 81 c3fduF_ not modelled 98.2 15 PDB header:isomerase Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii 82 c3m6nA_ not modelled 98.2 14 PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff 83 d1szoa_ not modelled 98.2 11 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 84 d1wdka4 not modelled 98.2 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 85 c1rjnC_ not modelled 98.2 16 PDB header:lyase Chain: C: PDB Molecule:menb; PDBTitle: the crystal structure of menb (rv0548c) from mycobacterium2 tuberculosis in complex with the coa portion of naphthoyl coa 86 c2d3tB_ not modelled 98.2 15 PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v 87 c3p85A_ not modelled 98.2 13 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase; PDBTitle: crystal structure enoyl-coa hydratase from mycobacterium avium 88 c3qkaB_ not modelled 98.2 17 PDB header:lyase Chain: B: PDB Molecule:enoyl-coa hydratase, echa5; PDBTitle: crystal structure of enoyl-coa hydratase echa5 from mycobacterium2 marinum 89 c3h0uB_ not modelled 98.2 21 PDB header:lyase Chain: B: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from2 streptomyces avermitilis 90 c2wtbA_ not modelled 98.2 17 PDB header:oxidoreductase Chain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2); PDBTitle: arabidopsis thaliana multifuctional protein, mfp2 91 c3r0oA_ not modelled 98.1 18 PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium 92 c3hp0B_ not modelled 98.1 16 PDB header:lyase Chain: B: PDB Molecule:putative polyketide biosynthesis enoyl-coa PDBTitle: crystal structure of a putative polyketide biosynthesis2 enoyl-coa hydratase (pksh) from bacillus subtilis 93 c2deoA_ not modelled 98.1 20 PDB header:hydrolase Chain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii 94 c3qxiA_ not modelled 98.1 16 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase echa1; PDBTitle: crystal structure of enoyl-coa hydratase echa1 from mycobacterium2 marinum 95 c2x58B_ not modelled 98.1 15 PDB header:oxidoreductase Chain: B: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: the crystal structure of mfe1 liganded with coa 96 c3swxB_ not modelled 98.1 16 PDB header:isomerase Chain: B: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 97 c3bezC_ not modelled 98.0 19 PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals 98 d1sg4a1 not modelled 98.0 14 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 99 c3he2C_ not modelled 98.0 16 PDB header:lyase Chain: C: PDB Molecule:enoyl-coa hydratase echa6; PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis 100 c3trrA_ not modelled 98.0 15 PDB header:isomerase Chain: A: PDB Molecule:probable enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 101 c2w3pB_ not modelled 97.9 14 PDB header:lyase Chain: B: PDB Molecule:benzoyl-coa-dihydrodiol lyase; PDBTitle: boxc crystal structure 102 c3qreA_ not modelled 97.9 17 PDB header:lyase Chain: A: PDB Molecule:enoyl-coa hydratase, echa12_1; PDBTitle: crystal structure of an enoyl-coa hydratase echa12_1 from2 mycobacterium marinum 103 d1yg6a1 not modelled 97.9 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 104 c3gkbA_ not modelled 97.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative enoyl-coa hydratase; PDBTitle: crystal structure of a putative enoyl-coa hydratase from streptomyces2 avermitilis 105 c3qxzA_ not modelled 97.9 16 PDB header:lyase,isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus 106 c2j5gL_ not modelled 97.9 10 PDB header:hydrolase Chain: L: PDB Molecule:alr4455 protein; PDBTitle: the native structure of a beta-diketone hydrolase from the2 cyanobacterium anabaena sp. pcc 7120 107 d2f6ia1 not modelled 97.8 11 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 108 c3laoA_ not modelled 97.8 11 PDB header:lyase, isomerase Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase; PDBTitle: crystal structure of enoyl-coa hydratase from pseudomonas2 aeruginosa pa01 109 c2pg8C_ not modelled 97.8 19 PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog 110 d1pjha_ not modelled 97.8 14 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 111 c2f6iG_ not modelled 97.7 11 PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease, putative; PDBTitle: crystal structure of the clpp protease catalytic domain from2 plasmodium falciparum 112 c3q7hM_ not modelled 97.6 13 PDB header:hydrolase Chain: M: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of the clpp subunit of the atp-dependent clp protease from2 coxiella burnetii 113 c3p2lD_ not modelled 97.6 16 PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: crystal structure of atp-dependent clp protease subunit p from2 francisella tularensis 114 d2cbya1 not modelled 97.6 15 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 115 c3kthD_ not modelled 97.5 21 PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form 116 c2cbyG_ not modelled 97.4 15 PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease proteolytic subunit 1; PDBTitle: crystal structure of the atp-dependent clp protease2 proteolytic subunit 1 (clpp1) from mycobacterium3 tuberculosis 117 d1y7oa1 not modelled 97.4 11 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit 118 c1tg6G_ not modelled 97.3 18 PDB header:hydrolase Chain: G: PDB Molecule:putative atp-dependent clp protease proteolytic subunit; PDBTitle: crystallography and mutagenesis point to an essential role for the n-2 terminus of human mitochondrial clpp 119 c1y7oE_ not modelled 97.3 10 PDB header:hydrolase Chain: E: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: the structure of streptococcus pneumoniae a153p clpp 120 d1tg6a1 not modelled 97.0 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Clp protease, ClpP subunit

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0