Email l.a.kelley@imperial.ac.uk Description P76192 Date Thu Jan 5 12:20:18 GMT 2012 Unique Job ID 3ff474ac8e7680f9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1aorB_ 100.0 30 PDB header:oxidoreductase Chain: B: PDB Molecule:aldehyde ferredoxin oxidoreductase; PDBTitle: structure of a hyperthermophilic tungstopterin enzyme,2 aldehyde ferredoxin oxidoreductase 2 c1b4nD_ 100.0 29 PDB header:oxidoreductase Chain: D: PDB Molecule:formaldehyde ferredoxin oxidoreductase; PDBTitle: formaldehyde ferredoxin oxidoreductase from pyrococcus furiosus,2 complexed with glutarate 3 d1aora1 100.0 23 Fold:Aldehyde ferredoxin oxidoreductase, C-terminal domains Superfamily:Aldehyde ferredoxin oxidoreductase, C-terminal domains Family:Aldehyde ferredoxin oxidoreductase, C-terminal domains 4 d1b25a1 100.0 23 Fold:Aldehyde ferredoxin oxidoreductase, C-terminal domains Superfamily:Aldehyde ferredoxin oxidoreductase, C-terminal domains Family:Aldehyde ferredoxin oxidoreductase, C-terminal domains 5 d1b25a2 100.0 40 Fold:Aldehyde ferredoxin oxidoreductase, N-terminal domain Superfamily:Aldehyde ferredoxin oxidoreductase, N-terminal domain Family:Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 d1aora2 100.0 44 Fold:Aldehyde ferredoxin oxidoreductase, N-terminal domain Superfamily:Aldehyde ferredoxin oxidoreductase, N-terminal domain Family:Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 d2fug32 55.6 15 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 8 c2e7zA_ 51.8 30 PDB header:lyase Chain: A: PDB Molecule:acetylene hydratase ahy; PDBTitle: acetylene hydratase from pelobacter acetylenicus 9 c2vpyE_ 48.4 15 PDB header:oxidoreductase Chain: E: PDB Molecule:thiosulfate reductase; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) 10 c2nyaF_ 47.6 15 PDB header:oxidoreductase Chain: F: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli 11 d1ogya2 45.9 12 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 12 c1ogyA_ 39.2 14 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the heterodimeric nitrate reductase2 from rhodobacter sphaeroides 13 d1g8ka2 32.3 20 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 14 c1g8jC_ 32.1 15 PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis 15 c2iv2X_ 30.2 22 PDB header:oxidoreductase Chain: X: PDB Molecule:formate dehydrogenase h; PDBTitle: reinterpretation of reduced form of formate dehydrogenase h2 from e. coli 16 d2iv2x2 29.9 19 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 17 c3dfuB_ 29.9 14 PDB header:oxidoreductase Chain: B: PDB Molecule:uncharacterized protein from 6-phosphogluconate PDBTitle: crystal structure of a putative rossmann-like dehydrogenase (cgl2689)2 from corynebacterium glutamicum at 2.07 a resolution 18 d2jioa2 29.7 22 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 19 c2v45A_ 29.6 19 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: a new catalytic mechanism of periplasmic nitrate reductase2 from desulfovibrio desulfuricans atcc 27774 from3 crystallographic and epr data and based on detailed4 analysis of the sixth ligand 20 c1du9A_ 28.7 50 PDB header:toxin Chain: A: PDB Molecule:bmp02 neurotoxin; PDBTitle: solution structure of bmp02, a natural scorpion toxin which2 blocks apamin-sensitive calcium-activated potassium3 channels, 25 structures 21 c1h0hA_ not modelled 28.5 15 PDB header:dehydrogenase Chain: A: PDB Molecule:formate dehydrogenase (large subunit); PDBTitle: tungsten containing formate dehydrogenase from2 desulfovibrio gigas 22 c2ktcA_ not modelled 25.6 38 PDB header:toxin Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 9.4; PDBTitle: solution structure of a novel hkv1.1 inhibiting scorpion toxin from2 mesibuthus tamulus 23 c2g5cD_ not modelled 25.5 22 PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus 24 c2h2wA_ not modelled 24.8 33 PDB header:transferase Chain: A: PDB Molecule:homoserine o-succinyltransferase; PDBTitle: crystal structure of homoserine o-succinyltransferase (ec 2.3.1.46)2 (homoserine o-transsuccinylase) (hts) (tm0881) from thermotoga3 maritima at 2.52 a resolution 25 d1yj5a2 not modelled 24.3 23 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 26 d2ghra1 not modelled 23.4 29 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:HTS-like 27 c3lx4B_ not modelled 23.4 13 PDB header:oxidoreductase Chain: B: PDB Molecule:fe-hydrogenase; PDBTitle: stepwise [fefe]-hydrogenase h-cluster assembly revealed in the2 structure of hyda(deltaefg) 28 c2pv7B_ not modelled 22.7 31 PDB header:isomerase, oxidoreductase Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm) PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution 29 d1u5ta1 not modelled 22.0 5 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 30 c3gmbB_ not modelled 20.2 26 PDB header:oxidoreductase Chain: B: PDB Molecule:2-methyl-3-hydroxypyridine-5-carboxylic acid PDBTitle: crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic2 acid oxygenase 31 c3iufA_ not modelled 20.0 27 PDB header:protein binding Chain: A: PDB Molecule:zinc finger protein ubi-d4; PDBTitle: crystal structure of the c2h2-type zinc finger domain of2 human ubi-d4 32 c2f1kD_ not modelled 19.5 19 PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase 33 c3cgxA_ not modelled 19.2 29 PDB header:transferase Chain: A: PDB Molecule:putative nucleotide-diphospho-sugar transferase; PDBTitle: crystal structure of putative nucleotide-diphospho-sugar transferase2 (yp_389115.1) from desulfovibrio desulfuricans g20 at 1.90 a3 resolution 34 c2l6aA_ not modelled 18.5 20 PDB header:signaling protein Chain: A: PDB Molecule:nacht, lrr and pyd domains-containing protein 12; PDBTitle: three-dimensional structure of the n-terminal effector pyrin domain of2 nlrp12 35 d2pv7a2 not modelled 18.4 31 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 36 c2vq3B_ not modelled 18.2 10 PDB header:oxidoreductase Chain: B: PDB Molecule:metalloreductase steap3; PDBTitle: crystal structure of the membrane proximal oxidoreductase2 domain of human steap3, the dominant ferric reductase of3 the erythroid transferrin cycle 37 c2fugC_ not modelled 18.1 15 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 38 c3d1lB_ not modelled 17.7 10 PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadp oxidoreductase bf3122; PDBTitle: crystal structure of putative nadp oxidoreductase bf3122 from2 bacteroides fragilis 39 c1np3B_ not modelled 17.1 18 PDB header:oxidoreductase Chain: B: PDB Molecule:ketol-acid reductoisomerase; PDBTitle: crystal structure of class i acetohydroxy acid isomeroreductase from2 pseudomonas aeruginosa 40 d2psba1 not modelled 17.0 22 Fold:YerB-like Superfamily:YerB-like Family:YerB-like 41 c2psbA_ not modelled 17.0 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yerb protein; PDBTitle: crystal structure of yerb protein from bacillus subtilis.2 northeast structural genomics target sr586 42 d1h0ha2 not modelled 16.6 17 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 43 d2ahra2 not modelled 16.1 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 44 d2f1ka2 not modelled 15.8 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 45 d2pgda2 not modelled 15.7 27 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 46 d1yqga2 not modelled 15.2 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 47 d1g99a2 not modelled 14.8 24 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Acetokinase-like 48 c3dzbA_ not modelled 14.7 19 PDB header:biosynthetic protein Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus 49 c2rafC_ not modelled 14.6 15 PDB header:oxidoreductase Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase; PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution 50 d2g5ca2 not modelled 14.2 27 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 51 d2oiea1 not modelled 14.1 18 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 52 c3qhaB_ not modelled 14.1 19 PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from mycobacterium2 avium 104 53 d1f0ya2 not modelled 13.3 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 54 c1z82A_ not modelled 13.1 24 PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from2 thermotoga maritima at 2.00 a resolution 55 c3ktdC_ not modelled 13.0 15 PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution 56 d1kqfa2 not modelled 12.9 22 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 57 d1vpda2 not modelled 12.2 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 58 c1wxpA_ not modelled 12.2 19 PDB header:transport protein Chain: A: PDB Molecule:tho complex subunit 1; PDBTitle: solution structure of the death domain of nuclear matrix2 protein p84 59 c3o0yC_ not modelled 12.1 6 PDB header:lipid binding protein Chain: C: PDB Molecule:lipoprotein; PDBTitle: the crystal structure of the putative lipoprotein from colwellia2 psychrerythraea 60 c2ofpB_ not modelled 12.1 12 PDB header:oxidoreductase Chain: B: PDB Molecule:ketopantoate reductase; PDBTitle: crystal structure of escherichia coli ketopantoate2 reductase in a ternary complex with nadp+ and pantoate 61 d1i36a2 not modelled 12.0 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 62 c3b1fA_ not modelled 12.0 13 PDB header:oxidoreductase Chain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans 63 d1a9xa1 not modelled 11.9 15 Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain 64 c1ks9A_ not modelled 11.7 12 PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: ketopantoate reductase from escherichia coli 65 c2axoA_ not modelled 11.3 83 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein atu2684; PDBTitle: x-ray crystal structure of protein agr_c_4864 from agrobacterium2 tumefaciens. northeast structural genomics consortium target atr35. 66 c1i36A_ not modelled 11.3 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein mth1747; PDBTitle: structure of conserved protein mth1747 of unknown function2 reveals structural similarity with 3-hydroxyacid3 dehydrogenases 67 d2axoa1 not modelled 11.2 83 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Atu2684-like 68 c2fpgA_ not modelled 10.9 19 PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain, PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp 69 c1wcnA_ not modelled 10.9 35 PDB header:rna-binding protein Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: nmr structure of the carboxyterminal domains of escherichia2 coli nusa 70 c2uyyD_ not modelled 10.9 15 PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac 71 c3k3qB_ not modelled 10.8 13 PDB header:immune system Chain: B: PDB Molecule:botulinum neurotoxin type a; PDBTitle: crystal structure of a llama antibody complexed with the c.2 botulinum neurotoxin serotype a catalytic domain 72 c3g17H_ not modelled 10.5 12 PDB header:structural genomics, unknown function Chain: H: PDB Molecule:similar to 2-dehydropantoate 2-reductase; PDBTitle: structure of putative 2-dehydropantoate 2-reductase from2 staphylococcus aureus 73 d2jeka1 not modelled 10.3 32 Fold:Rv1873-like Superfamily:Rv1873-like Family:Rv1873-like 74 c2howB_ not modelled 10.3 10 PDB header:hydrolase Chain: B: PDB Molecule:356aa long hypothetical dipeptidase; PDBTitle: dipeptidase (ph0974) from pyrococcus horikoshii ot3 75 c3idwA_ not modelled 10.3 39 PDB header:endocytosis Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1; PDBTitle: crystal structure of sla1 homology domain 2 76 c3qf2B_ not modelled 10.1 15 PDB header:apoptosis Chain: B: PDB Molecule:nacht, lrr and pyd domains-containing protein 3; PDBTitle: crystal structure of nalp3 pyd 77 d1bg6a2 not modelled 10.0 24 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 78 c1kqgA_ not modelled 9.7 20 PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase, nitrate-inducible, major subunit; PDBTitle: formate dehydrogenase n from e. coli 79 c2eapA_ not modelled 9.7 19 PDB header:signaling protein Chain: A: PDB Molecule:lymphocyte cytosolic protein 2; PDBTitle: solution structure of the n-terminal sam-domain of human2 lymphocyte cytosolic protein 2 80 c2yx6C_ not modelled 9.6 13 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein ph0822; PDBTitle: crystal structure of ph0822 81 d1af7a1 not modelled 9.5 16 Fold:Chemotaxis receptor methyltransferase CheR, N-terminal domain Superfamily:Chemotaxis receptor methyltransferase CheR, N-terminal domain Family:Chemotaxis receptor methyltransferase CheR, N-terminal domain 82 c1e1hC_ not modelled 9.4 13 PDB header:hydrolase Chain: C: PDB Molecule:botulinum neurotoxin type a light chain; PDBTitle: crystal structure of recombinant botulinum neurotoxin type2 a light chain, self-inhibiting zn endopeptidase. 83 c3ju3A_ not modelled 9.3 16 PDB header:oxidoreductase Chain: A: PDB Molecule:probable 2-oxoacid ferredoxin oxidoreductase, alpha chain; PDBTitle: crystal structure of alpha chain of probable 2-oxoacid ferredoxin2 oxidoreductase from thermoplasma acidophilum 84 c3i83B_ not modelled 9.3 20 PDB header:oxidoreductase Chain: B: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from methylococcus2 capsulatus 85 d1wdka3 not modelled 9.3 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 86 c3bd1B_ not modelled 9.2 14 PDB header:transcription Chain: B: PDB Molecule:cro protein; PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1 87 c2q4pA_ not modelled 9.0 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein rs21-c6; PDBTitle: ensemble refinement of the crystal structure of protein from mus2 musculus mm.29898 88 d2a3qa1 not modelled 9.0 18 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 89 c2kn6A_ not modelled 9.0 28 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis-associated speck-like protein containing a card; PDBTitle: structure of full-length human asc (apoptosis-associated speck-like2 protein containing a card) 90 d1trba1 not modelled 9.0 15 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 91 c3k96B_ not modelled 8.9 15 PDB header:oxidoreductase Chain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii 92 c3ewiB_ not modelled 8.9 24 PDB header:transferase Chain: B: PDB Molecule:n-acylneuraminate cytidylyltransferase; PDBTitle: structural analysis of the c-terminal domain of murine cmp-2 sialic acid synthetase 93 c3iukB_ not modelled 8.9 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of putative bacterial protein of unknown function2 (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold3 similar to that of m32 carboxypeptidases 94 d3c8ya1 not modelled 8.8 14 Fold:Fe-only hydrogenase Superfamily:Fe-only hydrogenase Family:Fe-only hydrogenase 95 c2vouA_ not modelled 8.8 29 PDB header:oxidoreductase Chain: A: PDB Molecule:2,6-dihydroxypyridine hydroxylase; PDBTitle: structure of 2,6-dihydroxypyridine-3-hydroxylase from2 arthrobacter nicotinovorans 96 c3h0mE_ not modelled 8.7 15 PDB header:ligase Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus 97 d1nvma1 not modelled 8.6 33 Fold:RuvA C-terminal domain-like Superfamily:post-HMGL domain-like Family:DmpG/LeuA communication domain-like 98 d1y5ia2 not modelled 8.6 10 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 99 c2p2vA_ not modelled 8.5 36 PDB header:transferase Chain: A: PDB Molecule:alpha-2,3-sialyltransferase; PDBTitle: crystal structure analysis of monofunctional alpha-2,3-2 sialyltransferase cst-i from campylobacter jejuni