Fold library entry viewer: c1aorB_

Added to library: Tue Mar 16 13:57:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Y	G	N	W	G	R	F	I	R	V	N	L	S	T	G	D	I	K	V	E	E	Y	D	E	E	L	A	K	K	W	L	G	S	R	G	L	A	I	Y	L	L	L	K	E	M	D	P	T	V	D	P	L	S	P	E	N	K	L	I	I	A	A	G	P	L	T	G	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S							T	T	T	T																	S													S		T	T	S		T	T	S	T	T	S								T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	P	T	G	G	R	Y	N	V	V	T	K	S	P	L	T	G	F	I	T	M	A	N	S	G	G	Y	F	G	A	E	L	K	F	A	G	Y	D	A	I	V	V	E	G	K	A	E	K	P	V	Y	I	Y	I	K	D	E	H	I	E	I	R	D	A	S	H	I	W	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T											T	T	T	S	S								S	S									T		S						S			S	S								T	T								T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	S	E	T	E	A	T	I	R	K	E	V	G	S	E	K	V	K	I	A	S	I	G	P	A	G	E	N	L	V	K	F	A	A	I	M	N	D	G	H	R	A	A	G	R	G	G	V	G	A	V	M	G	S	K	N	L	K	A	I	A	V	E	G	S	K	T	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S	S												T	T		T	T	B					T	T	T					S	S	S								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	A	D	K	Q	K	F	M	L	V	V	R	E	K	V	N	K	L	R	N	D	P	V	A	G	G	G	L	P	K	Y	G	T	A	V	L	V	N	I	I	N	E	N	G	L	Y	P	V	K	N	F	Q	T	G	V	Y	P	Y	A	Y	E	Q	S	G	E	A	M	A	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																			S					T							G	G	G								T	T				B	T	T	T	T	B	S			T	T	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	L	V	R	N	K	P	C	Y	A	C	P	I	G	C	G	R	V	N	R	L	P	T	V	G	E	T	E	G	P	E	Y	E	S	V	W	A	L	G	A	N	L	G	I	N	D	L	A	S	I	I	E	A	N	H	M	C	D	E	L	G	L	D	T	I	S	T	G	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								T	T		S	S									T	T	T															T	G	G	G	T																		T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	A	T	A	M	E	L	Y	E	K	G	H	I	K	D	E	E	L	G	D	A	P	P	F	R	W	G	N	T	E	V	L	H	Y	Y	I	E	K	I	A	K	R	E	G	F	G	D	K	L	A	E	G	S	Y	R	L	A	E	S	Y	G	H	P	E	L	S	M	T	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S						T	T	S					T	T		T												T	T		T	T					T	T								T	T	T		G	G	G					T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	L	E	L	P	A	Y	D	P	R	G	A	E	G	H	G	L	G	Y	A	T	N	N	R	G	G	C	H	I	K	N	Y	M	I	S	P	E	I	L	G	Y	P	Y	K	M	D	P	H	D	V	S	D	D	K	I	K	M	L	I	L	F	Q	D	L	T	A	L	I	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S	S		G	G	G												T	T	S	S		S	G	G	G		T					T	T		S	S	S				T	T			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	G	L	C	L	F	T	T	F	G	L	G	A	D	D	Y	R	D	L	L	N	A	A	L	G	W	D	F	T	T	E	D	Y	L	K	I	G	E	R	I	W	N	A	E	R	L	F	N	L	K	A	G	L	D	P	A	R	D	D	T	L	P	K	R	F	L	E	E	P	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T			G	G	G	G	T	T															T																											T							S									S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Sequence	P	E	G	P	N	K	G	H	T	V	R	L	K	E	M	L	P	R	Y	Y	K	L	R	G	W	T	E	D	G	K	I	P	K	E	K	L	E	E	L	G	I	A	E	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T	T	T																	T			T	T	S										T	T		G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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