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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2howB_

Fold library idPDB HeaderMoleculeTitle
c2howB_PDB header: hydrolaseChain: B: PDB Molecule: 356aa long hypothetical dipeptidase;PDBTitle: dipeptidase (ph0974) from pyrococcus horikoshii ot3


Added to library: Tue Mar 16 14:18:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRLEKFIHLLGERGFDGALISPGTNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYENVVNNFPAT
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Known secondary structure (DSSP)
TT


SS



S

TTS

TTS
GGGTTTTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FWHDGENPYAKLREILEELGISKGRILIEDTMRADWLIGIMKLGKFTFQPLSSLIKELRMIKDKEEVKMM
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Known secondary structure (DSSP)
TTS
TT
S
TTS
TTSSTTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence EHASRIADKVFEEILTWDLIGMKERELALKIELLIRELSDGIAFEPIVASGENAANPHHEPGERKIRKGD
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Known secondary structure (DSSP) TTS

TT
BSSSS

GGGGG
TT



S
B

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGY
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Known secondary structure (DSSP)
TT

SSS


BTTSBTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GEYFIHRTGHGLGLDVHEEPYIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEGKGRRLTKAE
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Known secondary structure (DSSP) GGG

S
S
SSSSSSTT


B

TT


TTT
BTTS



 ......
Sequence RELIIL
Predicted secondary structure

SS confidence





Known secondary structure (DSSP)
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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