Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	R	I	L	L	S	N	D	D	G	V	H	A	P	G	I	Q	T	L	A	K	A	L	R	E	F	A	D	V	Q	V	V	A	P	D	R	N	R	S	G	A	S	N	S	L	T	L	E	S	S	L	R	T	F	T	F	E	N	G	D
Secondary structure
SS confidence
Disorder		?	?																																					?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		I	A	V	Q	M	G	T	P	T	D	C	V	Y	L	G	V	N	A	L	M	R	P	R	P	D	I	V	V	S	G	I	N	A	G	P	N	L	G	D	D	V	I	Y	S	G	T	V	A	A	A	M	E	G	R	H	L	G	F	P	A
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		L	A	V	S	L	D	G	H	K	H	Y	D	T	A	A	A	V	T	C	S	I	L	R	A	L	C	K	E	P	L	R	T	G	R	I	L	N	I	N	V	P	D	L	P	L	D	Q	I	K	G	I	R	V	T	R	C	G	T	R	H
Secondary structure
SS confidence
Disorder																																												?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		P	A	D	Q	V	I	P	Q	Q	D	P	R	G	N	T	L	Y	W	I	G	P	P	G	G	K	C	D	A	G	P	G	T	D	F	A	A	V	D	E	G	Y	V	S	I	T	P	L	H	V	D	L	T	A	H	S	A	Q	D	V	V
Secondary structure
SS confidence
Disorder									?															?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.
Sequence		S	D	W	L	N	S	V	G	V	G	T	Q	W
Secondary structure
SS confidence
Disorder								?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2v4o chain B Region: 1 - 253 Aligned: 253 Modelled: 253 Confidence: 100.0% Identity: 92% PDB header:hydrolase Chain: B: PDB Molecule:multifunctional protein sur e; PDBTitle: crystal structure of salmonella typhimurium sure at 2.752 angstrom resolution in monoclinic form Phyre2 PDB 2phj chain A Region: 2 - 245 Aligned: 244 Modelled: 244 Confidence: 100.0% Identity: 43% PDB header:hydrolase Chain: A: PDB Molecule:5'-nucleotidase sure; PDBTitle: crystal structure of sure protein from aquifex aeolicus Phyre2 PDB 1j9j chain A Region: 1 - 245 Aligned: 242 Modelled: 245 Confidence: 100.0% Identity: 39% Fold: SurE-like Superfamily: SurE-like Family: SurE-like Phyre2 PDB 1l5x chain A Region: 1 - 243 Aligned: 240 Modelled: 240 Confidence: 100.0% Identity: 33% Fold: SurE-like Superfamily: SurE-like Family: SurE-like Phyre2 PDB 2e6g chain I Region: 1 - 238 Aligned: 224 Modelled: 238 Confidence: 100.0% Identity: 38% PDB header:hydrolase Chain: I: PDB Molecule:5'-nucleotidase sure; PDBTitle: crystal structure of the stationary phase survival protein sure from2 thermus thermophilus hb8 in complex with phosphate Phyre2 PDB 1yxo chain B Region: 1 - 170 Aligned: 168 Modelled: 170 Confidence: 91.6% Identity: 12% PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593 Phyre2 PDB 3hbj chain A Region: 1 - 124 Aligned: 108 Modelled: 114 Confidence: 89.0% Identity: 15% PDB header:transferase Chain: A: PDB Molecule:flavonoid 3-o-glucosyltransferase; PDBTitle: structure of ugt78g1 complexed with udp Phyre2 PDB 2p6p chain B Region: 1 - 34 Aligned: 34 Modelled: 34 Confidence: 87.3% Identity: 29% PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 Phyre2 PDB 2gej chain A Region: 1 - 37 Aligned: 37 Modelled: 37 Confidence: 86.5% Identity: 38% PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man Phyre2 PDB 2qzs chain A Region: 1 - 36 Aligned: 36 Modelled: 36 Confidence: 85.1% Identity: 28% PDB header:transferase Chain: A: PDB Molecule:glycogen synthase; PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb) Phyre2 PDB 2bis chain A domain 1 Region: 1 - 38 Aligned: 38 Modelled: 38 Confidence: 81.5% Identity: 29% Fold: UDP-Glycosyltransferase/glycogen phosphorylase Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase Family: Glycosyl transferases group 1 Phyre2 PDB 1rrv chain A Region: 1 - 39 Aligned: 36 Modelled: 39 Confidence: 81.1% Identity: 31% Fold: UDP-Glycosyltransferase/glycogen phosphorylase Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase Family: Gtf glycosyltransferase Phyre2 PDB 3c4v chain B Region: 1 - 39 Aligned: 39 Modelled: 39 Confidence: 80.0% Identity: 28% PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p. Phyre2 PDB 3ej6 chain D Region: 2 - 35 Aligned: 34 Modelled: 34 Confidence: 79.9% Identity: 26% PDB header:oxidoreductase Chain: D: PDB Molecule:catalase-3; PDBTitle: neurospora crassa catalase-3 crystal structure Phyre2 PDB 3ot5 chain D Region: 1 - 123 Aligned: 109 Modelled: 123 Confidence: 78.9% Identity: 10% PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes Phyre2 PDB 1rzu chain A Region: 1 - 36 Aligned: 36 Modelled: 36 Confidence: 77.3% Identity: 22% Fold: UDP-Glycosyltransferase/glycogen phosphorylase Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase Family: Glycosyl transferases group 1 Phyre2 PDB 1ka9 chain H Region: 1 - 37 Aligned: 34 Modelled: 37 Confidence: 74.0% Identity: 29% Fold: Flavodoxin-like Superfamily: Class I glutamine amidotransferase-like Family: Class I glutamine amidotransferases (GAT) Phyre2 PDB 1pn3 chain A Region: 1 - 34 Aligned: 31 Modelled: 34 Confidence: 72.4% Identity: 39% Fold: UDP-Glycosyltransferase/glycogen phosphorylase Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase Family: Gtf glycosyltransferase Phyre2 PDB 1o6c chain A Region: 1 - 126 Aligned: 116 Modelled: 123 Confidence: 72.3% Identity: 13% Fold: UDP-Glycosyltransferase/glycogen phosphorylase Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase Family: UDP-N-acetylglucosamine 2-epimerase Phyre2 PDB 2hqo chain A Region: 1 - 90 Aligned: 76 Modelled: 79 Confidence: 71.4% Identity: 16% PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Phyre2 1 c2v4oB_ 2 c2phjA_ 3 d1j9ja_ 4 d1l5xa_ 5 c2e6gI_ 6 c1yxoB_ 7 c3hbjA_ 8 c2p6pB_ 9 c2gejA_ 10 c2qzsA_ 11 d2bisa1 12 d1rrva_ 13 c3c4vB_ 14 c3ej6D_ 15 c3ot5D_ 16 d1rzua_ 17 d1ka9h_ 18 d1pn3a_ 19 d1o6ca_ 20 c2hqoA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2v4oB_ 100.0 92 PDB header:hydrolase Chain: B: PDB Molecule:multifunctional protein sur e; PDBTitle: crystal structure of salmonella typhimurium sure at 2.752 angstrom resolution in monoclinic form 2 c2phjA_ 100.0 43 PDB header:hydrolase Chain: A: PDB Molecule:5'-nucleotidase sure; PDBTitle: crystal structure of sure protein from aquifex aeolicus 3 d1j9ja_ 100.0 39 Fold:SurE-like Superfamily:SurE-like Family:SurE-like 4 d1l5xa_ 100.0 33 Fold:SurE-like Superfamily:SurE-like Family:SurE-like 5 c2e6gI_ 100.0 38 PDB header:hydrolase Chain: I: PDB Molecule:5'-nucleotidase sure; PDBTitle: crystal structure of the stationary phase survival protein sure from2 thermus thermophilus hb8 in complex with phosphate 6 c1yxoB_ 91.6 12 PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593 7 c3hbjA_ 89.0 15 PDB header:transferase Chain: A: PDB Molecule:flavonoid 3-o-glucosyltransferase; PDBTitle: structure of ugt78g1 complexed with udp 8 c2p6pB_ 87.3 29 PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 9 c2gejA_ 86.5 38 PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man 10 c2qzsA_ 85.1 28 PDB header:transferase Chain: A: PDB Molecule:glycogen synthase; PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb) 11 d2bisa1 81.5 29 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1 12 d1rrva_ 81.1 31 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Gtf glycosyltransferase 13 c3c4vB_ 80.0 28 PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p. 14 c3ej6D_ 79.9 26 PDB header:oxidoreductase Chain: D: PDB Molecule:catalase-3; PDBTitle: neurospora crassa catalase-3 crystal structure 15 c3ot5D_ 78.9 10 PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes 16 d1rzua_ 77.3 22 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1 17 d1ka9h_ 74.0 29 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 18 d1pn3a_ 72.4 39 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Gtf glycosyltransferase 19 d1o6ca_ 72.3 13 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase 20 c2hqoA_ 71.4 16 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 21 c3l3bA_ not modelled 69.7 16 PDB header:biosynthetic protein Chain: A: PDB Molecule:es1 family protein; PDBTitle: crystal structure of isoprenoid biosynthesis protein with2 amidotransferase-like domain from ehrlichia chaffeensis at 1.90a3 resolution 22 c2iv3B_ not modelled 69.0 18 PDB header:transferase Chain: B: PDB Molecule:glycosyltransferase; PDBTitle: crystal structure of avigt4, a glycosyltransferase involved2 in avilamycin a biosynthesis 23 d1iira_ not modelled 67.3 39 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Gtf glycosyltransferase 24 c3r0jA_ not modelled 66.5 22 PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis 25 c2jjmH_ not modelled 63.3 15 PDB header:transferase Chain: H: PDB Molecule:glycosyl transferase, group 1 family protein; PDBTitle: crystal structure of a family gt4 glycosyltransferase from2 bacillus anthracis orf ba1558. 26 c1vkzA_ not modelled 62.4 11 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution 27 d1kgsa2 not modelled 62.1 22 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 28 d1ny5a1 not modelled 61.2 16 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 29 d1s3la_ not modelled 57.5 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 30 c1s3mA_ not modelled 57.5 16 PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase 31 c3uk7B_ not modelled 55.1 19 PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d 32 c1sy7B_ not modelled 50.4 24 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase 1; PDBTitle: crystal structure of the catalase-1 from neurospora crassa, native2 structure at 1.75a resolution. 33 c2iufA_ not modelled 49.6 30 PDB header:oxidoreductase Chain: A: PDB Molecule:catalase; PDBTitle: the structures of penicillium vitale catalase: resting2 state, oxidised state (compound i) and complex with3 aminotriazole 34 d1dz3a_ not modelled 49.1 13 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 35 d1p80a1 not modelled 46.0 15 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Catalase, C-terminal domain 36 d1a2oa1 not modelled 45.5 17 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 37 d1f6da_ not modelled 44.7 15 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase 38 c3h1gA_ not modelled 44.2 16 PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori 39 c2iyaB_ not modelled 43.5 16 PDB header:transferase Chain: B: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering 40 c2r60A_ not modelled 43.4 24 PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii 41 c3c97A_ not modelled 42.4 20 PDB header:signaling protein, transferase Chain: A: PDB Molecule:signal transduction histidine kinase; PDBTitle: crystal structure of the response regulator receiver domain2 of a signal transduction histidine kinase from aspergillus3 oryzae 42 c3oy2A_ not modelled 41.9 13 PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a 43 d1wd5a_ not modelled 41.5 26 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 44 c1p81A_ not modelled 37.8 15 PDB header:oxidoreductase Chain: A: PDB Molecule:catalase hpii; PDBTitle: crystal structure of the d181e variant of catalase hpii2 from e. coli 45 c3d0qB_ not modelled 35.7 26 PDB header:transferase Chain: B: PDB Molecule:protein calg3; PDBTitle: crystal structure of calg3 from micromonospora echinospora determined2 in space group i222 46 d1ptma_ not modelled 35.5 11 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like 47 c3lp8A_ not modelled 35.5 19 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase; PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis 48 c3othB_ not modelled 34.5 25 PDB header:transferase/antibiotic Chain: B: PDB Molecule:calg1; PDBTitle: crystal structure of calg1, calicheamicin glycostyltransferase, tdp2 and calicheamicin alpha3i bound form 49 c2qv0A_ not modelled 34.0 17 PDB header:transcription Chain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae 50 d2acva1 not modelled 33.7 14 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDPGT-like 51 d1vhqa_ not modelled 32.7 22 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:DJ-1/PfpI 52 c3f6cB_ not modelled 32.4 9 PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli 53 d1qo0d_ not modelled 30.8 21 Fold:Flavodoxin-like Superfamily:CheY-like Family:Positive regulator of the amidase operon AmiR 54 c2fe9A_ not modelled 29.3 27 PDB header:rna binding protein Chain: A: PDB Molecule:protein vts1; PDBTitle: solution structure of the vts1 sam domain in the presence2 of rna 55 c3ia7A_ not modelled 29.2 26 PDB header:transferase Chain: A: PDB Molecule:calg4; PDBTitle: crystal structure of calg4, the calicheamicin glycosyltransferase 56 d1y0ya2 not modelled 28.9 23 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases 57 d2r25b1 not modelled 28.3 20 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 58 d1vi1a_ not modelled 27.0 22 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PlsX-like 59 d2a9va1 not modelled 26.6 28 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 60 d1sy7a1 not modelled 26.5 24 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Catalase, C-terminal domain 61 d2blla1 not modelled 26.1 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 62 c3n7tA_ not modelled 25.1 19 PDB header:protein binding Chain: A: PDB Molecule:macrophage binding protein; PDBTitle: crystal structure of a macrophage binding protein from coccidioides2 immitis 63 c1kgsA_ not modelled 24.9 22 PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima 64 c1ulzA_ not modelled 23.9 14 PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase 65 d1wl8a1 not modelled 23.5 18 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 66 c2eseA_ not modelled 23.1 21 PDB header:protein/rna complex Chain: A: PDB Molecule:vts1p; PDBTitle: structure of the sam domain of vts1p in complex with rna 67 d1dbwa_ not modelled 23.0 14 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 68 c3icpA_ not modelled 22.9 38 PDB header:isomerase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of udp-galactose 4-epimerase 69 c3ihsB_ not modelled 21.8 20 PDB header:transport protein Chain: B: PDB Molecule:phosphocarrier protein hpr; PDBTitle: crystal structure of a phosphocarrier protein hpr from2 bacillus anthracis str. ames 70 c2b6gA_ not modelled 21.7 21 PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain 71 c3gt7A_ not modelled 21.2 24 PDB header:hydrolase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of signal receiver domain of signal2 transduction histidine kinase from syntrophus3 aciditrophicus 72 c2xdqA_ not modelled 20.6 18 PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex 73 c2gpwC_ not modelled 20.0 17 PDB header:ligase Chain: C: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli. 74 c1ny5A_ not modelled 19.9 27 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state 75 d1ecfa1 not modelled 19.6 27 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 76 c2h1fB_ not modelled 19.5 12 PDB header:transferase Chain: B: PDB Molecule:lipopolysaccharide heptosyltransferase-1; PDBTitle: e. coli heptosyltransferase waac with adp 77 c2iyfA_ not modelled 19.2 20 PDB header:transferase Chain: A: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering 78 d1w25a1 not modelled 19.2 32 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 79 c2dzdB_ not modelled 19.1 10 PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase 80 c3m2pD_ not modelled 19.1 14 PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 4-epimerase; PDBTitle: the crystal structure of udp-n-acetylglucosamine 4-epimerase2 from bacillus cereus 81 d2c1ia1 not modelled 19.0 16 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 82 c3hfwA_ not modelled 18.7 18 PDB header:hydrolase Chain: A: PDB Molecule:protein adp-ribosylarginine hydrolase; PDBTitle: crystal structure of human adp-ribosylhydrolase 1 (harh1) 83 d1o94c_ not modelled 18.5 22 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:ETFP subunits 84 c3hdgE_ not modelled 18.3 20 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the n-terminal domain of an2 uncharacterized protein (ws1339) from wolinella3 succinogenes 85 c3le1B_ not modelled 18.1 16 PDB header:transferase Chain: B: PDB Molecule:phosphotransferase system, hpr-related proteins; PDBTitle: crystal structure of apohpr monomer from thermoanaerobacter2 tengcongensis 86 c2p5uC_ not modelled 17.9 28 PDB header:isomerase Chain: C: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of thermus thermophilus hb8 udp-glucose 4-2 epimerase complex with nad 87 d1vkza2 not modelled 17.9 13 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 88 c3ouzA_ not modelled 17.0 18 PDB header:ligase Chain: A: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni 89 c3nooB_ not modelled 16.9 15 PDB header:lyase Chain: B: PDB Molecule:thij/pfpi family protein; PDBTitle: crystal structure of c101a isocyanide hydratase from pseudomonas2 fluorescens 90 c3iaaB_ not modelled 16.9 30 PDB header:transferase Chain: B: PDB Molecule:calg2; PDBTitle: crystal structure of calg2, calicheamicin glycosyltransferase, tdp2 bound form 91 d1dcfa_ not modelled 16.6 20 Fold:Flavodoxin-like Superfamily:CheY-like Family:Receiver domain of the ethylene receptor 92 d1n2sa_ not modelled 16.4 27 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 93 c1ecjB_ not modelled 16.3 27 PDB header:transferase Chain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer 94 c3eodA_ not modelled 16.2 26 PDB header:signaling protein Chain: A: PDB Molecule:protein hnr; PDBTitle: crystal structure of n-terminal domain of e. coli rssb 95 c3eulB_ not modelled 16.1 23 PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis 96 d1f0ka_ not modelled 16.0 18 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Peptidoglycan biosynthesis glycosyltransferase MurG 97 c1gsoA_ not modelled 15.6 24 PDB header:ligase Chain: A: PDB Molecule:protein (glycinamide ribonucleotide synthetase); PDBTitle: glycinamide ribonucleotide synthetase (gar-syn) from e.2 coli. 98 c3d8tB_ not modelled 15.5 14 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: thermus thermophilus uroporphyrinogen iii synthase 99 c3l4bG_ not modelled 15.4 21 PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0