Fold library entry viewer: c2iufA_

Added to library: Tue Mar 16 12:26:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	Q	F	L	S	Q	F	Y	L	N	D	Q	D	V	Y	L	T	S	N	V	G	G	P	I	Q	D	E	N	S	L	S	A	G	Q	R	G	A	T	L	L	Q	D	F	I	F	R	E	K	I	Q	R	F	D	H	E	R	V	P	E	R	A	V	H	A	R	G	T	G	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T					S	S				B		T	T	S		B				S	S			B	S	S	T	T			B		T	T													T							S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	T	F	T	S	Y	G	D	W	S	N	L	T	A	A	S	F	L	S	A	E	G	K	E	T	P	M	F	T	R	F	S	T	V	A	G	S	R	G	S	A	D	T	A	R	D	V	H	G	F	A	T	R	F	Y	T	D	E	G	N	F	D	I	V	G	N	N	I	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			T	T	T				G	G	G	S	S	T	T												S	S			T	T			T	T	S	S												T	T									S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	F	I	Q	D	A	I	L	F	P	D	L	I	H	A	V	K	P	R	G	D	N	Q	I	P	Q	A	A	T	A	H	D	S	A	W	D	F	F	S	Q	Q	P	S	V	L	H	T	L	L	W	A	A	G	H	G	I	P	R	S	F	R	H	V	N	G	F	G	V	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S		G	G	G									S			T	T	T			S	T	T				S										S	G	G	G									G	G	G	S	B	S		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	R	L	V	T	D	D	G	K	T	K	L	V	K	F	H	W	K	G	L	Q	G	K	A	S	F	V	W	E	E	A	Q	Q	T	A	G	K	N	A	D	F	R	Q	D	L	F	Q	S	I	Q	A	G	R	F	P	E	W	E	L	G	V	Q	I	M	Q	E	Q	D	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T													S	S				B														T	T											T	T														G	G	G	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	F	G	F	D	L	L	D	P	T	K	I	V	P	E	E	L	V	P	V	T	I	L	G	K	M	Q	L	N	R	N	P	N	Y	F	A	E	T	E	Q	V	M	F	Q	P	G	H	I	V	R	G	V	D	F	T	E	D	P	L	L	Q	G	R	L	F	S	Y	L	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S		T	T		T	T					T	T	T	S																				T	T	T					T	T				T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	L	N	R	H	G	G	P	N	F	E	Q	L	P	I	N	R	P	R	A	P	I	H	N	N	N	R	D	G	A	G	Q	M	F	I	P	L	D	P	N	A	Y	S	P	N	T	E	N	K	G	S	P	K	Q	A	N	E	T	V	G	K	G	F	F	T	A	P	E	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S		G	G	G	S	T	T	T			S	S					S					T	T								S				S	S		S	T	T	T	T		S					S	S	S	T	T						T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	S	G	K	L	Q	R	T	L	S	T	T	F	E	N	N	W	S	Q	P	R	L	F	W	N	S	L	V	N	A	Q	K	E	F	I	V	D	A	R	F	E	T	S	N	V	S	S	S	V	V	R	D	D	V	I	I	Q	L	N	R	I	S	D	N	L	A	T	R	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								G	G	G				S									T	S																	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	A	I	G	V	E	A	P	K	P	N	S	S	F	Y	H	D	N	T	T	A	H	I	G	A	F	G	E	K	L	A	K	L	D	G	L	K	V	G	L	L	A	S	V	N	K	P	A	S	I	A	Q	G	A	K	L	Q	V	A	L	S	S	V	G	V	D	V	V	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T								G	G	G							T	T		S	S	S	S	S			S			T	T									T	T																G	G	G	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	E	R	A	N	N	V	D	E	T	Y	S	A	S	D	A	V	Q	F	D	A	V	V	V	A	D	G	A	E	G	L	F	G	A	D	S	F	T	V	E	P	S	A	G	S	G	A	S	T	L	Y	P	A	G	R	P	L	N	I	L	L	D	A	F	R	F	G	K	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					S	T	T			G	G	G		S						T	T		G	G	G			T	T	T	T	T					T	T	S				S	S	S		T	T													T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Sequence	G	A	L	G	S	G	S	D	A	L	E	S	G	Q	I	S	S	E	R	Q	G	V	Y	T	G	K	N	A	G	D	A	F	A	K	D	I	K	S	G	L	S	T	F	K	F	L	D	R	F	A	V	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G							T	T			T	T	S	T	T					S	S	S	S															S		G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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