Fold library entry viewer: c3ej6D_

Added to library: Tue Mar 16 12:34:55 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	V	D	A	R	Q	R	L	K	E	V	E	V	D	D	N	G	Q	F	M	T	T	D	F	G	G	N	I	E	E	Q	F	S	L	K	A	G	G	R	G	S	T	L	L	E	D	F	I	F	R	Q	K	L	Q	H	F	D	H	E	R	I	P	E	R	V	V	H	A	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	G	G	G	G	G	G					T	T				B		T	T			B				S	S			B	S	S	T	T			B		T	T													T							S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	A	H	G	I	F	T	S	Y	G	D	W	S	N	I	T	A	A	S	F	L	G	A	K	D	K	Q	T	P	V	F	V	R	F	S	T	V	A	G	S	R	G	S	A	D	T	A	R	D	V	H	G	F	A	T	R	F	Y	T	D	E	G	N	F	D	I	V	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S			T	T	T				G	G	G	S	S	T	T												S	S			T	T			T	T	S	S												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	I	P	V	F	F	I	Q	D	A	I	R	F	P	D	L	I	H	S	V	K	P	S	P	D	N	E	V	P	Q	A	A	T	A	H	D	S	A	W	D	F	F	S	S	Q	P	S	A	L	H	T	L	F	W	A	M	S	G	N	G	I	P	R	S	Y	R	H	M	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S		S		S	S	G	G	G									S		B	T	T	T	T	B	S	T	T				S										S	G	G	G									T	T	T	T	S	B	S		S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	G	I	H	T	F	R	L	V	T	E	D	G	K	S	K	L	V	K	W	H	W	K	T	K	Q	G	K	A	A	L	V	W	E	E	A	Q	V	L	A	G	K	N	A	D	F	H	R	Q	D	L	W	D	A	I	E	S	G	N	A	P	S	W	E	L	A	V	Q	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S							T	T	S												S	S				B														T	T												T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	E	D	K	A	Q	A	Y	G	F	D	L	L	D	P	T	K	F	L	P	E	E	F	A	P	L	Q	V	L	G	E	M	T	L	N	R	N	P	M	N	Y	F	A	E	T	E	Q	I	S	F	Q	P	G	H	I	V	R	G	V	D	F	T	E	D	P	L	L	Q	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	T		S	S	S		T	T		T	T					T	T	T	S															S	S					T	T	T					T	T				T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	Y	S	Y	L	D	T	Q	L	N	R	H	R	G	P	N	F	E	Q	L	P	I	N	R	P	V	S	G	V	H	N	N	H	R	D	G	Q	G	Q	A	W	I	H	K	N	I	H	H	Y	S	P	S	Y	L	N	K	G	Y	P	A	Q	A	N	Q	T	V	G	R	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S	S		G	G	G	S	T	T	T			S	S				S	S					T	T								S				S	S		T	T	T	T	T		S					S	S	S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	T	T	P	G	R	T	A	S	G	V	L	N	R	E	L	S	A	T	F	D	D	H	Y	T	Q	P	R	L	F	F	N	S	L	T	P	V	E	Q	Q	F	V	I	N	A	I	R	F	E	A	S	H	V	T	N	E	Q	V	K	K	N	V	L	E	Q	L	N	K	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T					S				S				G	G	G				S									T	S																		T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	D	V	A	K	R	V	A	V	A	L	G	L	E	A	P	Q	P	D	P	T	Y	Y	H	N	N	V	T	R	G	V	S	I	F	N	E	S	L	P	T	I	A	T	L	R	V	G	V	L	S	T	T	K	G	G	S	L	D	K	A	K	A	L	K	E	Q	L	E	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T								T	T	S							S	S			S	T	T	S			S			T	T									S	S	S	S															T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	L	K	V	T	V	I	A	E	Y	L	A	S	G	V	D	Q	T	Y	S	A	A	D	A	T	A	F	D	A	V	V	V	A	E	G	A	E	R	V	F	S	G	K	G	A	M	S	P	L	F	P	A	G	R	P	S	Q	I	L	T	D	G	Y	R	W	G	K	P	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S			T	T					S	T	T			G	G	G		S						T	T			T	T	T	S	S	T	T	S	S		T	T	S		T	T												T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
Sequence	A	V	G	S	A	K	K	A	L	Q	S	I	G	V	E	E	K	E	A	G	V	Y	A	G	A	Q	D	E	V	I	K	G	V	E	E	G	L	K	V	F	K	F	L	E	R	F	A	V	D	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G								T			S	S	S	T	T																					S		G	G	G	S			S

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PDB structure

FASTA sequence

Hidden Markov model

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