Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP78067
DateThu Jan 5 12:33:09 GMT 2012
Unique Job ID22ad2fb3499605c6

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3ippA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje;
PDBTitle: crystal structure of sulfur-free ynje
Confidence and coverage
Confidence:100.0% Coverage: 95%
412 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNG
Secondary structure 
SS confidence 
Disorder  ????
??????????
?
????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  PSGHELAALNLSASWLDKMSTEQLNAWIKQHNLKTDAPVALYGNDKDVDAVKTRLQKAGL
Secondary structure 
SS confidence 
Disorder  ???
?
????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  THISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKL
Secondary structure 
SS confidence 
Disorder 
??????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  YLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVA
Secondary structure 
SS confidence 
Disorder 
?
?
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  QIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQAR
Secondary structure 
SS confidence 
Disorder 
???
??
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  GLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTM
Secondary structure 
SS confidence 
Disorder 
??????
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  RSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDP
Secondary structure 
SS confidence 
Disorder 
?
?
Disorder confidence 
 
   .........430.....
Sequence  KNPVATGERGPDSSK
Secondary structure 
SS confidence 
Disorder 
????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3ipp chain A

3D model

Region: 24 - 435
Aligned: 412
Modelled: 412
Confidence: 100.0%
Identity: 100%
PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje;
PDBTitle: crystal structure of sulfur-free ynje

Phyre2

PDB 1okg chain A

3D model

Region: 143 - 425
Aligned: 260
Modelled: 282
Confidence: 100.0%
Identity: 20%
PDB header:transferase
Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase;
PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major

Phyre2

PDB 1yt8 chain A

3D model

Region: 23 - 434
Aligned: 338
Modelled: 375
Confidence: 100.0%
Identity: 22%
PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase;
PDBTitle: crystal structure of thiosulfate sulfurtransferase from pseudomonas2 aeruginosa

Phyre2

PDB 3hzu chain A

3D model

Region: 136 - 431
Aligned: 273
Modelled: 296
Confidence: 100.0%
Identity: 26%
PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis

Phyre2

PDB 1boi chain A

3D model

Region: 145 - 428
Aligned: 266
Modelled: 284
Confidence: 100.0%
Identity: 28%
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: n-terminally truncated rhodanese

Phyre2

PDB 3aax chain B

3D model

Region: 140 - 427
Aligned: 266
Modelled: 288
Confidence: 100.0%
Identity: 26%
PDB header:transferase
Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form

Phyre2

PDB 1uar chain A

3D model

Region: 138 - 429
Aligned: 272
Modelled: 284
Confidence: 100.0%
Identity: 29%
PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8

Phyre2

PDB 3olh chain A

3D model

Region: 142 - 425
Aligned: 265
Modelled: 284
Confidence: 100.0%
Identity: 24%
PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: human 3-mercaptopyruvate sulfurtransferase

Phyre2

PDB 1e0c chain A

3D model

Region: 136 - 425
Aligned: 265
Modelled: 290
Confidence: 100.0%
Identity: 22%
PDB header:sulfurtransferase
Chain: A: PDB Molecule:sulfurtransferase;
PDBTitle: sulfurtransferase from azotobacter vinelandii

Phyre2

PDB 1urh chain A

3D model

Region: 143 - 415
Aligned: 246
Modelled: 273
Confidence: 100.0%
Identity: 23%
PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: the "rhodanese" fold and catalytic mechanism of2 3-mercaptopyruvate sulfotransferases: crystal structure3 of ssea from escherichia coli

Phyre2

PDB 2eg4 chain B

3D model

Region: 165 - 425
Aligned: 221
Modelled: 261
Confidence: 100.0%
Identity: 24%
PDB header:transferase
Chain: B: PDB Molecule:probable thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase

Phyre2

PDB 3tp9 chain B

3D model

Region: 34 - 269
Aligned: 193
Modelled: 211
Confidence: 100.0%
Identity: 22%
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase and rhodanese domain protein;
PDBTitle: crystal structure of alicyclobacillus acidocaldarius protein with2 beta-lactamase and rhodanese domains

Phyre2

PDB 1uar chain A domain 2

3D model

Region: 290 - 429
Aligned: 130
Modelled: 139
Confidence: 99.9%
Identity: 27%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2

PDB 1rhs chain A domain 2

3D model

Region: 280 - 428
Aligned: 139
Modelled: 149
Confidence: 99.9%
Identity: 24%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2

PDB 1rhs chain A domain 1

3D model

Region: 142 - 277
Aligned: 130
Modelled: 136
Confidence: 99.9%
Identity: 30%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2

PDB 1okg chain A domain 2

3D model

Region: 305 - 427
Aligned: 118
Modelled: 120
Confidence: 99.9%
Identity: 22%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2

PDB 1urh chain A domain 1

3D model

Region: 142 - 283
Aligned: 132
Modelled: 142
Confidence: 99.9%
Identity: 26%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2

PDB 1e0c chain A domain 2

3D model

Region: 283 - 425
Aligned: 132
Modelled: 143
Confidence: 99.9%
Identity: 24%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2

PDB 1okg chain A domain 1

3D model

Region: 142 - 287
Aligned: 133
Modelled: 146
Confidence: 99.9%
Identity: 18%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2

PDB 1uar chain A domain 1

3D model

Region: 138 - 291
Aligned: 140
Modelled: 154
Confidence: 99.9%
Identity: 31%
Fold: Rhodanese/Cell cycle control phosphatase
Superfamily: Rhodanese/Cell cycle control phosphatase
Family: Multidomain sulfurtransferase (rhodanese)

Phyre2
1
c3ippA_
2
c1okgA_
3
c1yt8A_
4
c3hzuA_
5
c1boiA_
6
c3aaxB_
7
c1uarA_
8
c3olhA_
9
c1e0cA_
10
c1urhA_
11
c2eg4B_
12
c3tp9B_
13
d1uara2
14
d1rhsa2
15
d1rhsa1
16
d1okga2
17
d1urha1
18
d1e0ca2
19
d1okga1
20
d1uara1
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ippA_
100.0 100 PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje;
PDBTitle: crystal structure of sulfur-free ynje
2c1okgA_
100.0 20 PDB header:transferase
Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase;
PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major
3c1yt8A_
100.0 22 PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase;
PDBTitle: crystal structure of thiosulfate sulfurtransferase from pseudomonas2 aeruginosa
4c3hzuA_
100.0 26 PDB header:transferase
Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis
5c1boiA_
100.0 28 PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: n-terminally truncated rhodanese
6c3aaxB_
100.0 26 PDB header:transferase
Chain: B: PDB Molecule:putative thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase2 cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic3 form
7c1uarA_
100.0 29 PDB header:transferase
Chain: A: PDB Molecule:rhodanese;
PDBTitle: crystal structure of rhodanese from thermus thermophilus hb8
8c3olhA_
100.0 24 PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: human 3-mercaptopyruvate sulfurtransferase
9c1e0cA_
100.0 22 PDB header:sulfurtransferase
Chain: A: PDB Molecule:sulfurtransferase;
PDBTitle: sulfurtransferase from azotobacter vinelandii
10c1urhA_
100.0 23 PDB header:transferase
Chain: A: PDB Molecule:3-mercaptopyruvate sulfurtransferase;
PDBTitle: the "rhodanese" fold and catalytic mechanism of2 3-mercaptopyruvate sulfotransferases: crystal structure3 of ssea from escherichia coli
11c2eg4B_
100.0 24 PDB header:transferase
Chain: B: PDB Molecule:probable thiosulfate sulfurtransferase;
PDBTitle: crystal structure of probable thiosulfate sulfurtransferase
12c3tp9B_
100.0 22 PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase and rhodanese domain protein;
PDBTitle: crystal structure of alicyclobacillus acidocaldarius protein with2 beta-lactamase and rhodanese domains
13d1uara2
99.9 27 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
14d1rhsa2
99.9 24 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
15d1rhsa1
99.9 30 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
16d1okga2
99.9 22 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
17d1urha1
99.9 26 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
18d1e0ca2
99.9 24 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
19d1okga1
99.9 18 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
20d1uara1
99.9 31 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
21d1e0ca1
not modelled 99.9 20 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
22d1urha2
not modelled 99.9 19 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
23d1yt8a1
not modelled 99.8 22 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
24c3d1pA_
not modelled 99.8 22 PDB header:transferase
Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase yor285w;
PDBTitle: atomic resolution structure of uncharacterized protein from2 saccharomyces cerevisiae
25d1yt8a3
not modelled 99.8 28 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
26c3ilmD_
not modelled 99.8 18 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr3790 protein;
PDBTitle: crystal structure of the alr3790 protein from anabaena sp. northeast2 structural genomics consortium target nsr437h
27d1tq1a_
not modelled 99.7 18 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
28c2hhgA_
not modelled 99.7 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rpa3614;
PDBTitle: structure of protein of unknown function rpa3614, possible tyrosine2 phosphatase, from rhodopseudomonas palustris cga009
29c3emeA_
not modelled 99.7 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:rhodanese-like domain protein;
PDBTitle: crystal structure of rhodanese-like domain protein from2 staphylococcus aureus
30c3nhvE_
not modelled 99.7 22 PDB header:structural genomics, unknown function
Chain: E: PDB Molecule:bh2092 protein;
PDBTitle: crystal structure of bh2092 protein from bacillus halodurans,2 northeast structural genomics consortium target bhr228f
31c3gk5A_
not modelled 99.7 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized rhodanese-related protein
PDBTitle: crystal structure of rhodanese-related protein (tvg0868615)2 from thermoplasma volcanium, northeast structural genomics3 consortium target tvr109a
32d1qxna_
not modelled 99.7 22 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
33d1yt8a4
not modelled 99.7 20 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
34c2fsxA_
not modelled 99.7 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cog0607: rhodanese-related sulfurtransferase;
PDBTitle: crystal structure of rv0390 from m. tuberculosis
35c3i2vA_
not modelled 99.7 13 PDB header:transferase
Chain: A: PDB Molecule:adenylyltransferase and sulfurtransferase mocs3;
PDBTitle: crystal structure of human mocs3 rhodanese-like domain
36c3k9rA_
not modelled 99.7 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:alr3790 protein;
PDBTitle: x-ray structure of the rhodanese-like domain of the alr3790 protein2 from anabaena sp. northeast structural genomics consortium target3 nsr437c.
37d1gmxa_
not modelled 99.7 17 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Single-domain sulfurtransferase
38c3fojA_
not modelled 99.7 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of ssp1007 from staphylococcus2 saprophyticus subsp. saprophyticus. northeast structural3 genomics target syr101a.
39c2dcqA_
not modelled 99.6 13 PDB header:unknown function
Chain: A: PDB Molecule:putative protein at4g01050;
PDBTitle: fully automated nmr structure determination of the2 rhodanese homology domain at4g01050(175-295) from3 arabidopsis thaliana
40c2k0zA_
not modelled 99.6 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein hp1203;
PDBTitle: solution nmr structure of protein hp1203 from helicobacter pylori2 26695. northeast structural genomics consortium (nesg) target3 pt1/ontario center for structural proteomics target hp1203
41d1yt8a2
not modelled 99.6 23 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Multidomain sulfurtransferase (rhodanese)
42d1t3ka_
not modelled 99.6 16 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
43c3g5jA_
not modelled 99.6 17 PDB header:nucleotide binding protein
Chain: A: PDB Molecule:putative atp/gtp binding protein;
PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630
44c3icrA_
not modelled 99.6 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:coenzyme a-disulfide reductase;
PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd
45c3f4aA_
not modelled 99.6 17 PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein ygr203w;
PDBTitle: structure of ygr203w, a yeast protein tyrosine phosphatase2 of the rhodanese family
46c2jtqA_
not modelled 99.6 19 PDB header:transferase
Chain: A: PDB Molecule:phage shock protein e;
PDBTitle: rhodanese from e.coli
47c3ntaA_
not modelled 99.5 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide
PDBTitle: structure of the shewanella loihica pv-4 nadh-dependent persulfide2 reductase
48d1whba_
not modelled 99.5 12 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8
49c2j6pF_
not modelled 99.5 15 PDB header:oxidoreductase
Chain: F: PDB Molecule:sb(v)-as(v) reductase;
PDBTitle: structure of as-sb reductase from leishmania major
50d1c25a_
not modelled 99.5 14 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
51d1ymka1
not modelled 99.5 14 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
52c3r2uC_
not modelled 99.5 22 PDB header:hydrolase
Chain: C: PDB Molecule:metallo-beta-lactamase family protein;
PDBTitle: 2.1 angstrom resolution crystal structure of metallo-beta-lactamase2 from staphylococcus aureus subsp. aureus col
53c2vswB_
not modelled 99.4 19 PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 16;
PDBTitle: the structure of the rhodanese domain of the human dual2 specificity phosphatase 16
54c3op3A_
not modelled 99.4 17 PDB header:hydrolase
Chain: A: PDB Molecule:m-phase inducer phosphatase 3;
PDBTitle: crystal structure of cell division cycle 25c protein isoform a from2 homo sapiens
55d1hzma_
not modelled 99.4 14 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Cell cycle control phosphatase, catalytic domain
56c2uzqE_
not modelled 99.4 14 PDB header:hydrolase
Chain: E: PDB Molecule:m-phase inducer phosphatase 2;
PDBTitle: protein phosphatase, new crystal form
57d2gwfa1
not modelled 99.3 17 Fold:Rhodanese/Cell cycle control phosphatase
Superfamily:Rhodanese/Cell cycle control phosphatase
Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8
58c2oucB_
not modelled 99.3 18 PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 10;
PDBTitle: crystal structure of the map kinase binding domain of mkp5
59c1wv9B_
not modelled 99.1 19 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:rhodanese homolog tt1651;
PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8
60c3gxgA_
not modelled 94.4 15 PDB header:hydrolase
Chain: A: PDB Molecule:putative phosphatase (duf442);
PDBTitle: crystal structure of putative phosphatase (duf442) (yp_001181608.1)2 from shewanella putrefaciens cn-32 at 1.60 a resolution
61c3flhC_
not modelled 94.2 24 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein lp_1913;
PDBTitle: crystal structure of lp_1913 protein from lactobacillus2 plantarum,northeast structural genomics consortium target3 lpr140b
62c2f46A_
not modelled 89.6 26 PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a putative phosphatase (nma1982) from neisseria2 meningitidis z2491 at 1.41 a resolution
63d1npya1
not modelled 89.4 20 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
64d1ywfa1
not modelled 89.2 17 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Mycobacterial PtpB-like
65c1npyA_
not modelled 78.3 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like
PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607
66d1xria_
not modelled 77.2 15 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
67d1p15a_
not modelled 75.7 15 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
68c2nz2A_
not modelled 71.8 13 PDB header:ligase
Chain: A: PDB Molecule:argininosuccinate synthase;
PDBTitle: crystal structure of human argininosuccinate synthase in complex with2 aspartate and citrulline
69c2dg2D_
not modelled 71.4 24 PDB header:protein binding
Chain: D: PDB Molecule:apolipoprotein a-i binding protein;
PDBTitle: crystal structure of mouse apolipoprotein a-i binding2 protein
70c2b9yA_
not modelled 71.4 26 PDB header:isomerase
Chain: A: PDB Molecule:putative aminooxidase;
PDBTitle: crystal structure of cla-producing fatty acid isomerase2 from p. acnes
71c2i6oA_
not modelled 70.1 16 PDB header:hydrolase
Chain: A: PDB Molecule:sulfolobus solfataricus protein tyrosine
PDBTitle: crystal structure of the complex of the archaeal sulfolobus2 ptp-fold phosphatase with phosphopeptides n-g-(p)y-k-n
72c3tozA_
not modelled 68.6 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate dehydrogenase;
PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad.
73c2nz6A_
not modelled 67.1 13 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase eta;
PDBTitle: crystal structure of the ptprj inactivating mutant c1239s
74c1u24A_
not modelled 65.4 14 PDB header:hydrolase
Chain: A: PDB Molecule:myo-inositol hexaphosphate phosphohydrolase;
PDBTitle: crystal structure of selenomonas ruminantium phytase
75d1nkta4
not modelled 64.9 8 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
76c2imgA_
not modelled 64.5 17 PDB header:hydrolase
Chain: A: PDB Molecule:dual specificity protein phosphatase 23;
PDBTitle: crystal structure of dual specificity protein phosphatase2 23 from homo sapiens in complex with ligand malate ion
77d1vi2a1
not modelled 64.2 17 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
78c3djeA_
not modelled 64.2 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:fructosyl amine: oxygen oxidoreductase;
PDBTitle: crystal structure of the deglycating enzyme fructosamine2 oxidase from aspergillus fumigatus (amadoriase ii) in3 complex with fsa
79d1fpra_
not modelled 61.3 7 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
80d1xhoa_
not modelled 60.9 13 Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
81c2oz5A_
not modelled 60.5 13 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phosphotyrosine protein phosphatase ptpb;
PDBTitle: crystal structure of mycobacterium tuberculosis protein tyrosine2 phosphatase ptpb in complex with the specific inhibitor omts
82c3d3jA_
not modelled 60.1 16 PDB header:protein binding
Chain: A: PDB Molecule:enhancer of mrna-decapping protein 3;
PDBTitle: crystal structure of human edc3p
83d1lara1
not modelled 59.7 22 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
84c1vl2C_
not modelled 59.4 16 PDB header:ligase
Chain: C: PDB Molecule:argininosuccinate synthase;
PDBTitle: crystal structure of argininosuccinate synthase (tm1780) from2 thermotoga maritima at 1.65 a resolution
85c3s4oB_
not modelled 58.3 19 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein tyrosine phosphatase-like protein;
PDBTitle: protein tyrosine phosphatase (putative) from leishmania major
86c3s3fA_
not modelled 57.0 14 PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:tyrosine-protein phosphatase 10d;
PDBTitle: crystal structure of the catalytic domain of ptp10d from drosophila2 melanogaster with a small molecule inhibitor vanadate
87c2c7sA_
not modelled 56.8 14 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase kappa;
PDBTitle: crystal structure of human protein tyrosine phosphatase2 kappa at 1.95a resolution
88d1larb1
not modelled 56.8 22 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
89c3g7sA_
not modelled 56.7 11 PDB header:ligase
Chain: A: PDB Molecule:long-chain-fatty-acid--coa ligase (fadd-1);
PDBTitle: crystal structure of a long-chain-fatty-acid-coa ligase2 (fadd1) from archaeoglobus fulgidus
90d1rxda_
not modelled 56.3 11 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
91c3bnuA_
not modelled 56.2 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:polyamine oxidase fms1;
PDBTitle: crystal structure of polyamine oxidase fms1 from2 saccharomyces cerevisiae in complex with bis-(3s,3's)-3 methylated spermine
92c3d3kD_
not modelled 55.5 12 PDB header:protein binding
Chain: D: PDB Molecule:enhancer of mrna-decapping protein 3;
PDBTitle: crystal structure of human edc3p
93c3ohgA_
not modelled 55.3 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein from duf2233 family;
PDBTitle: crystal structure of a protein with unknown function from duf22332 family (bacova_00430) from bacteroides ovatus at 1.80 a resolution
94c3ivrA_
not modelled 55.2 13 PDB header:ligase
Chain: A: PDB Molecule:putative long-chain-fatty-acid coa ligase;
PDBTitle: crystal structure of putative long-chain-fatty-acid coa ligase from2 rhodopseudomonas palustris cga009
95c3u62A_
not modelled 55.1 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:shikimate dehydrogenase;
PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima
96c3rz2B_
not modelled 54.8 12 PDB header:hydrolase
Chain: B: PDB Molecule:protein tyrosine phosphatase type iva 1;
PDBTitle: crystal of prl-1 complexed with peptide
97c1xhoB_
not modelled 54.6 13 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:chorismate mutase;
PDBTitle: chorismate mutase from clostridium thermocellum cth-682
98c1w2wA_
not modelled 54.5 27 PDB header:isomerase
Chain: A: PDB Molecule:5-methylthioribose-1-phosphate isomerase;
PDBTitle: crystal structure of yeast ypr118w, a methylthioribose-1-2 phosphate isomerase related to regulatory eif2b subunits
99c2qcjB_
not modelled 53.9 11 PDB header:hydrolase
Chain: B: PDB Molecule:tyrosine-protein phosphatase non-receptor type
PDBTitle: native structure of lyp
100c2b49A_
not modelled 53.8 12 PDB header:hydrolase
Chain: A: PDB Molecule:protein tyrosine phosphatase, non-receptor type 3;
PDBTitle: crystal structure of the catalytic domain of protein tyrosine2 phosphatase, non-receptor type 3
101c2hy3A_
not modelled 53.8 14 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase gamma;
PDBTitle: crystal structure of the human tyrosine receptor phosphate gamma in2 complex with vanadate
102c3t38B_
not modelled 53.5 17 PDB header:oxidoreductase
Chain: B: PDB Molecule:arsenate reductase;
PDBTitle: corynebacterium glutamicum thioredoxin-dependent arsenate reductase2 cg_arsc1'
103c3etcB_
not modelled 52.9 20 PDB header:ligase
Chain: B: PDB Molecule:amp-binding protein;
PDBTitle: 2.1 a structure of acyl-adenylate synthetase from methanosarcina2 acetivorans containing a link between lys256 and cys298
104c3i36A_
not modelled 52.7 25 PDB header:hydrolase
Chain: A: PDB Molecule:vascular protein tyrosine phosphatase 1;
PDBTitle: crystal structure of rat protein tyrosine phosphatase eta catalytic2 domain
105c2qdmA_
not modelled 52.4 12 PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 7;
PDBTitle: crystal structure of the heptp catalytic domain c270s/d236a/q314a2 mutant
106c1z3iX_
not modelled 52.1 16 PDB header:recombination/dna binding
Chain: X: PDB Molecule:similar to rad54-like;
PDBTitle: structure of the swi2/snf2 chromatin remodeling domain of eukaryotic2 rad54
107c1amuB_
not modelled 51.9 24 PDB header:peptide synthetase
Chain: B: PDB Molecule:gramicidin synthetase 1;
PDBTitle: phenylalanine activating domain of gramicidin synthetase 12 in a complex with amp and phenylalanine
108c3o8qB_
not modelled 51.8 17 PDB header:oxidoreductase
Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha;
PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae
109c2qepA_
not modelled 51.3 14 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase n2;
PDBTitle: crystal structure of the d1 domain of ptprn2 (ia2beta)
110d1jzta_
not modelled 50.5 26 Fold:YjeF N-terminal domain-like
Superfamily:YjeF N-terminal domain-like
Family:YjeF N-terminal domain-like
111c2pa5A_
not modelled 50.3 19 PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 9;
PDBTitle: crystal structure of human protein tyrosine phosphatase ptpn9
112d1fuka_
not modelled 50.1 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
113c2bzlA_
not modelled 49.8 12 PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type
PDBTitle: crystal structure of the human protein tyrosine phosphatase2 n14 at 1.65 a resolution
114d1vl2a1
not modelled 49.5 19 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
115d1rpma_
not modelled 49.4 14 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Higher-molecular-weight phosphotyrosine protein phosphatases
116d1amua_
not modelled 49.2 24 Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
117c2j17A_
not modelled 49.1 15 PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase yil113w;
PDBTitle: ptyr bound form of sdp-1
118d1ohea2
not modelled 48.9 13 Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Dual specificity phosphatase-like
119c3i32A_
not modelled 48.7 8 PDB header:rna binding protein,hydrolase
Chain: A: PDB Molecule:heat resistant rna dependent atpase;
PDBTitle: dimeric structure of a hera helicase fragment including the c-terminal2 reca domain, the dimerization domain, and the rna binding domain
120c3o82A_
not modelled 48.6 24 PDB header:ligase
Chain: A: PDB Molecule:peptide arylation enzyme;
PDBTitle: structure of base n-terminal domain from acinetobacter baumannii bound2 to 5'-o-[n-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0