PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3i32A_

Fold library id	PDB Header	Molecule	Title
c3i32A_	PDB header: rna binding protein,hydrolase	Chain: A: PDB Molecule: heat resistant rna dependent atpase;	PDBTitle: dimeric structure of a hera helicase fragment including the2 c-terminal reca domain, the dimerization domain, and the3 rna binding domain

Links to external resources
Added to library: Sat Aug 28 22:37:15 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V T Y E E E A V P A P V R G R L E V L S D L L Y V A S P D R A M V F T R T K A E T E E I A Q G L L R L G H P A Q A L H G D M S Q G E R E R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
S S
S S T T T
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M G A F R Q G E V R V L V A T D V A A R G L D I P Q V D L V V H Y R M P D R A E A Y Q H R S G R T G G R V V L L Y G P R E R R D V E A L E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S T T T
S T T
S S S
S S T T T
S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A V G R R F K R V N P P T P E E V L E A K W R H L L A R L A R V P E K D Y R L Y Q D F A G R L F A E G R V E V V A A L L A L L L G G A P A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
T T T
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . .

Sequence R S L L T G E E G W R T Y K A T G P R L S L P R L V A L L K G Q G L E V G K V A E A E G G F Y V D L R P E A R P E V A G L R L E P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T T T
B S
B
T T
T T
T T
B
S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	T	Y	E	E	E	A	V	P	A	P	V	R	G	R	L	E	V	L	S	D	L	L	Y	V	A	S	P	D	R	A	M	V	F	T	R	T	K	A	E	T	E	E	I	A	Q	G	L	L	R	L	G	H	P	A	Q	A	L	H	G	D	M	S	Q	G	E	R	E	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S									S	S	S															S	S						S	S													T	T	T								S				T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	G	A	F	R	Q	G	E	V	R	V	L	V	A	T	D	V	A	A	R	G	L	D	I	P	Q	V	D	L	V	V	H	Y	R	M	P	D	R	A	E	A	Y	Q	H	R	S	G	R	T	G	G	R	V	V	L	L	Y	G	P	R	E	R	R	D	V	E	A	L	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S								S	T	T	T		S	T	T					S					S	S			S	S	T	T							T												S	S	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	V	G	R	R	F	K	R	V	N	P	P	T	P	E	E	V	L	E	A	K	W	R	H	L	L	A	R	L	A	R	V	P	E	K	D	Y	R	L	Y	Q	D	F	A	G	R	L	F	A	E	G	R	V	E	V	V	A	A	L	L	A	L	L	L	G	G	A	P	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T																											T	T	S							T	T											T														T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Sequence	R	S	L	L	T	G	E	E	G	W	R	T	Y	K	A	T	G	P	R	L	S	L	P	R	L	V	A	L	L	K	G	Q	G	L	E	V	G	K	V	A	E	A	E	G	G	F	Y	V	D	L	R	P	E	A	R	P	E	V	A	G	L	R	L	E	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T	T			B	S		B							T	T													T	T										T	T						B		S	S						T	T