Emaill.a.kelley@imperial.ac.uk
DescriptionP0A7V3
DateThu Jan 5 11:06:18 GMT 2012
Unique Job ID1ccd52c24bed65f0

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2qbfC_



100.0 100 PDB header:ribosome
Chain: C: PDB Molecule:30s ribosomal protein s3;
PDBTitle: crystal structure of the bacterial ribosome from escherichia2 coli in complex with ribosome recycling factor (rrf). this3 file contains the 30s subunit of the second 70s ribosome.4 the entire crystal structure contains two 70s ribosomes and5 is described in remark 400.
2c1pnxC_



100.0 52 PDB header:ribosome
Chain: C: PDB Molecule:30s ribosomal protein s3;
PDBTitle: crystal structure of the wild type ribosome from e. coli,2 30s subunit of 70s ribosome. this file, 1pnx, contains3 only molecules of the 30s ribosomal subunit. the 50s4 subunit is in the pdb file 1pny.
3c2gy9C_



100.0 100 PDB header:ribosome
Chain: C: PDB Molecule:30s ribosomal subunit protein s3;
PDBTitle: structure of the 30s subunit of a pre-translocational e.2 coli ribosome obtained by fitting atomic models for rna and3 protein components into cryo-em map emd-1056
4c1hnwC_



100.0 52 PDB header:ribosome
Chain: C: PDB Molecule:30s ribosomal protein s3;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit2 in complex with tetracycline
5c3bbnC_



100.0 42 PDB header:ribosome
Chain: C: PDB Molecule:ribosomal protein s3;
PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.
6c2xznC_



100.0 21 PDB header:ribosome
Chain: C: PDB Molecule:kh domain containing protein;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
7c2zkqc_



100.0 25 PDB header:ribosomal protein/rna
Chain: C: PDB Molecule:rna expansion segment es4;
PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
8c1s1hC_



100.0 25 PDB header:ribosome
Chain: C: PDB Molecule:40s ribosomal protein s3;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
9c3izbB_



100.0 26 PDB header:ribosome
Chain: B: PDB Molecule:40s ribosomal protein rps3 (s3p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
10d2uubc2



100.0 62 Fold:Ribosomal protein S3 C-terminal domain
Superfamily:Ribosomal protein S3 C-terminal domain
Family:Ribosomal protein S3 C-terminal domain
11d2qalc2



100.0 100 Fold:Ribosomal protein S3 C-terminal domain
Superfamily:Ribosomal protein S3 C-terminal domain
Family:Ribosomal protein S3 C-terminal domain
12d2qalc1



100.0 100 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
13d2uubc1



100.0 43 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
14d1wh9a_



99.4 22 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
15c3gkuB_



94.2 18 PDB header:rna binding protein
Chain: B: PDB Molecule:probable rna-binding protein;
PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940
16c2pt7G_



92.7 15 PDB header:hydrolase/protein binding
Chain: G: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of cag virb11 (hp0525) and an inhibitory protein2 (hp1451)
17d1hh2p3



58.2 26 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
18d2asba3



53.9 21 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
19d1tuaa1



32.8 18 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
20c2hh3A_



27.3 32 PDB header:rna binding protein
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: solution structure of the third kh domain of ksrp
21c2hh2A_



not modelled 26.2 33 PDB header:rna binding protein
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: solution structure of the fourth kh domain of ksrp
22c2cy1A_



not modelled 26.1 22 PDB header:transcription
Chain: A: PDB Molecule:nusa protein homolog;
PDBTitle: crystal structure of ape1850
23d2axya1



not modelled 26.1 43 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
24c2asbA_



not modelled 22.7 21 PDB header:transcription/rna
Chain: A: PDB Molecule:transcription elongation protein nusa;
PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex
25d1dt4a_



not modelled 22.6 15 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
26d1j4wa1



not modelled 21.4 39 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
27c2anrA_



not modelled 19.7 33 PDB header:rna-binding protein/rna
Chain: A: PDB Molecule:neuro-oncological ventral antigen 1;
PDBTitle: crystal structure (ii) of nova-1 kh1/kh2 domain tandem with 25nt rna2 hairpin
28d1j4wa2



not modelled 19.3 26 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
29d1dtja_



not modelled 18.4 15 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
30d1khma_



not modelled 17.8 30 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
31d1ec6a_



not modelled 17.6 15 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
32d1wf3a2



not modelled 17.4 17 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
33d1we8a_



not modelled 16.2 19 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
34c1j4wA_



not modelled 15.5 41 PDB header:transcription/dna
Chain: A: PDB Molecule:fuse binding protein;
PDBTitle: complex of the kh3 and kh4 domains of fbp with a2 single_stranded 29mer dna oligonucleotide from the fuse3 element of the c-myc oncogene
35c1ztgD_



not modelled 15.3 44 PDB header:dna, rna binding protein/dna
Chain: D: PDB Molecule:poly(rc)-binding protein 1;
PDBTitle: human alpha polyc binding protein kh1
36d1wvna1



not modelled 15.2 26 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
37d1viga_



not modelled 15.0 16 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
38d1zzka1



not modelled 14.0 33 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
39d1x4na1



not modelled 13.9 19 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
40c1tuaA_



not modelled 13.7 31 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ape0754;
PDBTitle: 1.5 a crystal structure of a protein of unknown function2 ape0754 from aeropyrum pernix
41c2jvfA_



not modelled 13.7 19 PDB header:de novo protein
Chain: A: PDB Molecule:de novo protein m7;
PDBTitle: solution structure of m7, a computationally-designed2 artificial protein
42d2ctla1



not modelled 13.2 25 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
43d2ba0a3



not modelled 12.7 39 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
44d1x4ma1



not modelled 12.3 33 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
45c2dgrA_



not modelled 12.1 26 PDB header:rna binding protein
Chain: A: PDB Molecule:ring finger and kh domain-containing protein 1;
PDBTitle: solution structure of the second kh domain in ring finger2 and kh domain containing protein 1
46c1k0rB_



not modelled 11.8 21 PDB header:transcription
Chain: B: PDB Molecule:nusa;
PDBTitle: crystal structure of mycobacterium tuberculosis nusa
47d2ctja1



not modelled 11.6 22 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
48c3af5A_



not modelled 11.2 19 PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein ph1404;
PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii
49c3krmB_



not modelled 11.1 33 PDB header:rna binding protein
Chain: B: PDB Molecule:insulin-like growth factor 2 mrna-binding protein
PDBTitle: imp1 kh34
50c1hh2P_



not modelled 11.1 26 PDB header:transcription regulation
Chain: P: PDB Molecule:n utilization substance protein a;
PDBTitle: crystal structure of nusa from thermotoga maritima
51d2ctea1



not modelled 10.6 33 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
52d2cmea1



not modelled 10.6 50 Fold:SARS ORF9b-like
Superfamily:'SARS ORF9b-like
Family:SARS ORF9b-like
53c2fenA_



not modelled 10.6 43 PDB header:isomerase
Chain: A: PDB Molecule:3-carboxy-cis,cis-muconate lactonizing enzyme;
PDBTitle: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium2 radiobacter s2
54c2qndA_



not modelled 10.3 24 PDB header:rna binding protein
Chain: A: PDB Molecule:fmr1 protein;
PDBTitle: crystal structure of the kh1-kh2 domains from human fragile x mental2 retardation protein
55d2ctka1



not modelled 10.1 27 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
56c2jzxA_



not modelled 9.8 46 PDB header:rna binding protein
Chain: A: PDB Molecule:poly(rc)-binding protein 2;
PDBTitle: pcbp2 kh1-kh2 domains
57c2jvzA_



not modelled 9.3 36 PDB header:splicing
Chain: A: PDB Molecule:far upstream element-binding protein 2;
PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp
58c1l2fA_



not modelled 9.3 26 PDB header:transcription
Chain: A: PDB Molecule:n utilization substance protein a;
PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain
59c2w2rA_



not modelled 9.1 15 PDB header:viral protein
Chain: A: PDB Molecule:matrix protein;
PDBTitle: structure of the vesicular stomatitis virus matrix protein
60d1hsta_



not modelled 8.7 14 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Linker histone H1/H5
61d2ctma1



not modelled 8.6 19 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
62d1egaa2



not modelled 8.2 25 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
63d1myna_



not modelled 8.1 42 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Insect defensins
64c1egaB_



not modelled 7.6 18 PDB header:hydrolase
Chain: B: PDB Molecule:protein (gtp-binding protein era);
PDBTitle: crystal structure of a widely conserved gtpase era
65d2gysa1



not modelled 7.5 40 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Fibronectin type III
Family:Fibronectin type III
66d1c3ca_



not modelled 7.4 43 Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
67c1qysA_



not modelled 7.3 13 PDB header:de novo protein
Chain: A: PDB Molecule:top7;
PDBTitle: crystal structure of top7: a computationally designed2 protein with a novel fold
68c2pfmA_



not modelled 7.2 43 PDB header:lyase
Chain: A: PDB Molecule:adenylosuccinate lyase;
PDBTitle: crystal structure of adenylosuccinate lyase (purb) from bacillus2 anthracis
69d2ctfa1



not modelled 6.9 26 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
70c3gtdB_



not modelled 6.7 57 PDB header:lyase
Chain: B: PDB Molecule:fumarate hydratase class ii;
PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii
71d1tj7a_



not modelled 6.7 50 Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
72d1lg7a_



not modelled 6.6 12 Fold:VSV matrix protein
Superfamily:VSV matrix protein
Family:VSV matrix protein
73d1tjva_



not modelled 6.1 50 Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
74d2fmra_



not modelled 6.0 38 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
75c3ocfB_



not modelled 6.0 57 PDB header:lyase
Chain: B: PDB Molecule:fumarate lyase:delta crystallin;
PDBTitle: crystal structure of fumarate lyase:delta crystallin from brucella2 melitensis in native form
76c3ej9D_



not modelled 5.9 44 PDB header:hydrolase
Chain: D: PDB Molecule:beta-subunit of trans-3-chloroacrylic acid dehalogenase;
PDBTitle: structural and mechanistic analysis of trans-3-chloroacrylic acid2 dehalogenase activity
77d1f1oa_



not modelled 5.4 43 Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
78d1eu3a2



not modelled 5.3 19 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Superantigen toxins, C-terminal domain
Family:Superantigen toxins, C-terminal domain
79c3no9C_



not modelled 5.3 43 PDB header:lyase
Chain: C: PDB Molecule:fumarate hydratase class ii;
PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis
80d1dofa_



not modelled 5.2 14 Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase
81c3e04C_



not modelled 5.1 57 PDB header:lyase
Chain: C: PDB Molecule:fumarate hydratase;
PDBTitle: crystal structure of human fumarate hydratase
82d1yfma_



not modelled 5.0 57 Fold:L-aspartase-like
Superfamily:L-aspartase-like
Family:L-aspartase/fumarase