PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2qbfC_

Fold library id	PDB Header	Molecule	Title
c2qbfC_	PDB header: ribosome	Chain: C: PDB Molecule: 30s ribosomal protein s3;	PDBTitle: crystal structure of the bacterial ribosome from escherichia2 coli in complex with ribosome recycling factor (rrf). this3 file contains the 30s subunit of the second 70s ribosome.4 the entire crystal structure contains two 70s ribosomes and5 is described in remark 400.

Links to external resources
Added to library: Tue Mar 16 14:02:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G Q K V H P N G I R L G I V K P W N S T W F A N T K E F A D N L D S D F K V R Q Y L T K E L A K A S V S R I V I E R P A K S I R V T I H T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G T T T T S
S
S T T T G G G T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R P G I V I G K K G E D V E K L R K V V A D I A G V P A Q I N I A E V R K P E L D A K L V A D S I T S Q L E R R V M F R R A M K R A V Q N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T T S
S
G G G
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . .

Sequence M R L G A K G I K V E V S G R L G G A E I A R T E W Y R E G R V P L H T L R A D I D Y N T S E A H T T Y G V I G V K V W I F K G E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S G G G
S S
B
T T
S T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	Q	K	V	H	P	N	G	I	R	L	G	I	V	K	P	W	N	S	T	W	F	A	N	T	K	E	F	A	D	N	L	D	S	D	F	K	V	R	Q	Y	L	T	K	E	L	A	K	A	S	V	S	R	I	V	I	E	R	P	A	K	S	I	R	V	T	I	H	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	G	G	G	T	T	T	T	S			S							S	T	T																			T	G	G	G	T										T	T									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	P	G	I	V	I	G	K	K	G	E	D	V	E	K	L	R	K	V	V	A	D	I	A	G	V	P	A	Q	I	N	I	A	E	V	R	K	P	E	L	D	A	K	L	V	A	D	S	I	T	S	Q	L	E	R	R	V	M	F	R	R	A	M	K	R	A	V	Q	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						G	G	G														T	T	S										S		G	G	G															T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Sequence	M	R	L	G	A	K	G	I	K	V	E	V	S	G	R	L	G	G	A	E	I	A	R	T	E	W	Y	R	E	G	R	V	P	L	H	T	L	R	A	D	I	D	Y	N	T	S	E	A	H	T	T	Y	G	V	I	G	V	K	V	W	I	F	K	G	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			S								S	S	G	G	G		S	S									B				T	T		S	T	T												T	T