Email l.a.kelley@imperial.ac.uk Description P37648 Date Thu Jan 5 11:56:20 GMT 2012 Unique Job ID 1b2e5a2201840589

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3go9A_ 100.0 60 PDB header:hydrolase Chain: A: PDB Molecule:insulinase family protease; PDBTitle: predicted insulinase family protease from yersinia pestis 2 c1sqpA_ 100.0 13 PDB header:oxidoreductase Chain: A: PDB Molecule:ubiquinol-cytochrome-c reductase complex core protein i, PDBTitle: crystal structure analysis of bovine bc1 with myxothiazol 3 c1hr9D_ 100.0 16 PDB header:hydrolase Chain: D: PDB Molecule:mitochondrial processing peptidase beta subunit; PDBTitle: yeast mitochondrial processing peptidase beta-e73q mutant2 complexed with malate dehydrogenase signal peptide 4 c1nu1A_ 100.0 13 PDB header:oxidoreductase Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase complex core protein i, PDBTitle: crystal structure of mitochondrial cytochrome bc1 complexed with 2-2 nonyl-4-hydroxyquinoline n-oxide (nqno) 5 c1q2lA_ 100.0 15 PDB header:hydrolase Chain: A: PDB Molecule:protease iii; PDBTitle: crystal structure of pitrilysin 6 c2wk3A_ 100.0 12 PDB header:hydrolase Chain: A: PDB Molecule:insulin degrading enzyme; PDBTitle: crystal structure of human insulin-degrading enzyme in2 complex with amyloid-beta (1-42) 7 c2jbuB_ 100.0 12 PDB header:hydrolase Chain: B: PDB Molecule:insulin-degrading enzyme; PDBTitle: crystal structure of human insulin degrading enzyme2 complexed with co-purified peptides. 8 c1hr6C_ 100.0 13 PDB header:hydrolase Chain: C: PDB Molecule:mitochondrial processing peptidase alpha subunit; PDBTitle: yeast mitochondrial processing peptidase 9 c3hdiA_ 100.0 16 PDB header:hydrolase Chain: A: PDB Molecule:processing protease; PDBTitle: crystal structure of bacillus halodurans metallo peptidase 10 c3amiB_ 100.0 16 PDB header:hydrolase Chain: B: PDB Molecule:zinc peptidase; PDBTitle: the crystal structure of the m16b metallopeptidase subunit from2 sphingomonas sp. a1 11 c3eoqB_ 100.0 16 PDB header:hydrolase Chain: B: PDB Molecule:putative zinc protease; PDBTitle: the crystal structure of putative zinc protease beta-2 subunit from thermus thermophilus hb8 12 c3gwbA_ 100.0 15 PDB header:hydrolase Chain: A: PDB Molecule:peptidase m16 inactive domain family protein; PDBTitle: crystal structure of peptidase m16 inactive domain from pseudomonas2 fluorescens. northeast structural genomics target plr293l 13 c2fgeA_ 100.0 11 PDB header:hydrolase, plant protein Chain: A: PDB Molecule:zinc metalloprotease (insulinase family); PDBTitle: crystal structure of presequence protease prep from2 arabidopsis thaliana 14 c3amjB_ 100.0 12 PDB header:hydrolase Chain: B: PDB Molecule:zinc peptidase inactive subunit; PDBTitle: the crystal structure of the heterodimer of m16b peptidase from2 sphingomonas sp. a1 15 c1l0lB_ 100.0 11 PDB header:oxidoreductase Chain: B: PDB Molecule:ubiquinol-cytochrome c reductase complex core protein 2; PDBTitle: structure of bovine mitochondrial cytochrome bc1 complex with a bound2 fungicide famoxadone 16 c3cx5L_ 100.0 12 PDB header:oxidoreductase Chain: L: PDB Molecule:cytochrome b-c1 complex subunit 1, mitochondrial; PDBTitle: structure of complex iii with bound cytochrome c in reduced2 state and definition of a minimal core interface for3 electron transfer. 17 c3d3yA_ 100.0 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a conserved protein from enterococcus faecalis2 v583 18 c3cxhM_ 100.0 13 PDB header:oxidoreductase Chain: M: PDB Molecule:cytochrome b-c1 complex subunit 2, mitochondrial; PDBTitle: structure of yeast complex iii with isoform-2 cytochrome c2 bound and definition of a minimal core interface for3 electron transfer. 19 d1ppja1 100.0 19 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 20 d1hr6b1 100.0 19 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 21 d1bcca1 not modelled 100.0 18 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 22 d2fgea4 not modelled 100.0 9 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 23 d1hr6a1 not modelled 100.0 17 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 24 d1q2la4 not modelled 100.0 19 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 25 d1ppjb1 not modelled 100.0 15 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 26 d1bccb1 not modelled 100.0 15 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 27 d3cx5b1 not modelled 100.0 15 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 28 d3cx5a1 not modelled 100.0 14 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 29 d1hr6b2 not modelled 99.9 12 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 30 c3ivlA_ not modelled 99.9 10 PDB header:hydrolase Chain: A: PDB Molecule:putative zinc protease; PDBTitle: the crystal structure of the inactive peptidase domain of a putative2 zinc protease from bordetella parapertussis to 2.2a 31 d1bcca2 not modelled 99.8 8 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 32 d1ppjb2 not modelled 99.8 6 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 33 d1q2la1 not modelled 99.8 9 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 34 d1ppja2 not modelled 99.8 8 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 35 d1hr6a2 not modelled 99.8 9 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 36 d3cx5a2 not modelled 99.8 9 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 37 d1bccb2 not modelled 99.8 6 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 38 d2fgea3 not modelled 99.7 11 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 39 d2fgea2 not modelled 99.6 6 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 40 d1q2la2 not modelled 98.8 7 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 41 d2fgea1 not modelled 98.5 10 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 42 d1q2la3 not modelled 98.4 11 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like 43 c1g6uB_ not modelled 60.1 28 PDB header:de novo protein Chain: B: PDB Molecule:domain swapped dimer; PDBTitle: crystal structure of a domain swapped dimer 44 c3fhkF_ not modelled 56.1 18 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:upf0403 protein yphp; PDBTitle: crystal structure of apc1446, b.subtilis yphp disulfide2 isomerase 45 d1g5ta_ not modelled 21.7 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 46 c3l7vA_ not modelled 20.1 10 PDB header:transcription Chain: A: PDB Molecule:putative uncharacterized protein smu.1377c; PDBTitle: crystal structure of a hypothetical protein smu.1377c from2 streptococcus mutans ua159 47 d2rdea1 not modelled 16.0 4 Fold:Split barrel-like Superfamily:PilZ domain-like Family:PilZ domain 48 d1q5ma_ not modelled 15.5 40 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 49 c2qruA_ not modelled 13.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an alpha/beta hydrolase superfamily protein from2 enterococcus faecalis 50 d1tuza_ not modelled 13.9 5 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 51 d1g64b_ not modelled 13.8 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 52 c2bh7A_ not modelled 13.5 14 PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase; PDBTitle: crystal structure of a semet derivative of amid at 2.22 angstroms 53 d1fe0a_ not modelled 13.1 4 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 54 c3gnnA_ not modelled 12.0 21 PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide2 pyrophosphorylase from burkholderi pseudomallei 55 c2yw3E_ not modelled 11.9 15 PDB header:lyase Chain: E: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- PDBTitle: crystal structure analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-2 deydro-3-deoxyphosphogluconate aldolase from tthb1 56 d1yira1 not modelled 11.9 24 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase C-terminal domain 57 c2x3dC_ not modelled 11.4 5 PDB header:unknown function Chain: C: PDB Molecule:sso6206; PDBTitle: crystal structure of sso6206 from sulfolobus solfataricus p2 58 c1d2fB_ not modelled 11.4 21 PDB header:transferase Chain: B: PDB Molecule:maly protein; PDBTitle: x-ray structure of maly from escherichia coli: a pyridoxal-5'-2 phosphate-dependent enzyme acting as a modulator in mal gene3 expression 59 d1d2fa_ not modelled 11.3 21 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 60 c2pbrB_ not modelled 11.1 10 PDB header:transferase Chain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase (aq_969) from aquifex aeolicus2 vf5 61 c3lv8A_ not modelled 10.7 12 PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp 62 c3pajA_ not modelled 10.1 11 PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase, carboxylating; PDBTitle: 2.00 angstrom resolution crystal structure of a quinolinate2 phosphoribosyltransferase from vibrio cholerae o1 biovar eltor str.3 n16961 63 c1x1oC_ not modelled 9.8 11 PDB header:transferase Chain: C: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of project id tt0268 from thermus thermophilus hb8 64 c1qapA_ not modelled 9.7 16 PDB header:glycosyltransferase Chain: A: PDB Molecule:quinolinic acid phosphoribosyltransferase; PDBTitle: quinolinic acid phosphoribosyltransferase with bound2 quinolinic acid 65 d1pn0a3 not modelled 9.7 11 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:PHBH-like 66 c1i5kD_ not modelled 9.5 23 PDB header:blood clotting Chain: D: PDB Molecule:m protein; PDBTitle: structure and binding determinants of the recombinant kringle-2 domain2 of human plasminogen to an internal peptide from a group a3 streptococcal surface protein 67 c1i5kC_ not modelled 9.5 23 PDB header:blood clotting Chain: C: PDB Molecule:m protein; PDBTitle: structure and binding determinants of the recombinant kringle-2 domain2 of human plasminogen to an internal peptide from a group a3 streptococcal surface protein 68 c3ostA_ not modelled 8.5 10 PDB header:lipid binding protein Chain: A: PDB Molecule:serine/threonine-protein kinase kcc4; PDBTitle: structure of the kinase associated-1 (ka1) from kcc4p 69 c2kj4B_ not modelled 8.4 23 PDB header:blood clotting Chain: B: PDB Molecule:vek-30; PDBTitle: solution structure of the complex of vek-30 and plasminogen2 kringle 2 70 d2raqa1 not modelled 8.3 18 Fold:Ferredoxin-like Superfamily:MTH889-like Family:MTH889-like 71 c3qspB_ not modelled 8.1 19 PDB header:hydrolase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: analysis of a new family of widely distributed metal-independent alpha2 mannosidases provides unique insight into the processing of n-linked3 glycans, streptococcus pneumoniae sp_2144 non-productive substrate4 complex with alpha-1,6-mannobiose 72 c2h18A_ not modelled 8.1 23 PDB header:transport protein Chain: A: PDB Molecule:adp-ribosylation factor-like protein 8a; PDBTitle: structure of human adp-ribosylation factor-like 10b (arl10b) 73 d1geha2 not modelled 8.1 13 Fold:Ferredoxin-like Superfamily:RuBisCO, large subunit, small (N-terminal) domain Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase 74 c2doiB_ not modelled 8.0 23 PDB header:hydrolase Chain: B: PDB Molecule:plasminogen-binding group a streptococcal m-like protein PDBTitle: the x-ray crystallographic structure of the angiogenesis inhibitor,2 angiostatin, bound to a peptide from the group a streptococcus3 protein pam 75 c2do6A_ not modelled 7.9 19 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of rsgi ruh-065, a uba domain from human2 cdna 76 c3iwdC_ not modelled 7.7 23 PDB header:lyase Chain: C: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: t. maritima adometdc complex with 5'-deoxy-5'-dimethyl2 thioadenosine 77 c2adbA_ not modelled 7.7 14 PDB header:rna binding protein/rna Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd2 complexed with cucucu rna 78 c3ihjA_ not modelled 7.7 15 PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp 79 d1wxia1 not modelled 7.6 15 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 80 c3tl4X_ not modelled 7.6 12 PDB header:ligase Chain: X: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the trna binding domain of glutaminyl-trna2 synthetase from saccharomyces cerevisiae 81 c2d9sA_ not modelled 7.5 6 PDB header:ligase Chain: A: PDB Molecule:cbl e3 ubiquitin protein ligase; PDBTitle: solution structure of rsgi ruh-049, a uba domain from mouse2 cdna 82 c1z65A_ not modelled 7.5 16 PDB header:unknown function Chain: A: PDB Molecule:prion-like protein doppel; PDBTitle: mouse doppel 1-30 peptide 83 d1k8kd1 not modelled 7.5 24 Fold:Secretion chaperone-like Superfamily:Arp2/3 complex subunits Family:Arp2/3 complex subunits 84 c1yueA_ not modelled 7.4 33 PDB header:viral protein Chain: A: PDB Molecule:head vertex protein gp24; PDBTitle: bacteriophage t4 capsid vertex protein gp24 85 d1bxna2 not modelled 7.4 10 Fold:Ferredoxin-like Superfamily:RuBisCO, large subunit, small (N-terminal) domain Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase 86 c2i38A_ not modelled 7.4 22 PDB header:rna binding protein/chimera Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- PDBTitle: solution structure of the rrm of srp20 87 c2hvzA_ not modelled 7.3 18 PDB header:rna binding protein Chain: A: PDB Molecule:splicing factor, arginine/serine-rich 7; PDBTitle: solution structure of the rrm domain of sr rich factor 9g8 88 d1c7na_ not modelled 7.3 11 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 89 d2cq2a1 not modelled 7.2 7 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 90 c3l0gD_ not modelled 7.1 22 PDB header:transferase Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution 91 c2r47C_ not modelled 7.1 17 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein mth_862; PDBTitle: crystal structure of mth_862 protein of unknown function from2 methanothermobacter thermautotrophicus 92 c3llkA_ not modelled 7.1 20 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfhydryl oxidase 1; PDBTitle: sulfhydryl oxidase fragment of human qsox1 93 c2e5iA_ not modelled 6.9 17 PDB header:gene regulation Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like; PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like 94 d1h0ca_ not modelled 6.6 7 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 95 d1t3ta3 not modelled 6.6 14 Fold:PurS-like Superfamily:PurS-like Family:FGAM synthase PurL, PurS-like domain 96 c1w89E_ not modelled 6.5 17 PDB header:electron transport Chain: E: PDB Molecule:thioredoxin; PDBTitle: structure of the reduced form of human thioredoxin 2 97 d8ruca2 not modelled 6.5 8 Fold:Ferredoxin-like Superfamily:RuBisCO, large subunit, small (N-terminal) domain Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase 98 d1nh2b_ not modelled 6.4 15 Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain 99 d1nvpb_ not modelled 6.3 19 Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain