Fold library entry viewer: c2fgeA_

Added to library: Tue Mar 16 12:34:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	E	A	E	K	L	G	F	E	K	V	S	E	E	F	I	S	E	C	K	S	K	A	I	L	F	K	H	K	K	T	G	C	E	V	X	S	V	S	N	E	D	E	N	K	V	F	G	V	V	F	R	T	P	P	K	D	S	T	G	I	P	H	I	L	Q	H	S	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T										T	T	T	T									T	T	T										S		S	S												S	S	S	S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	G	S	R	K	Y	P	V	K	E	P	F	V	E	L	L	K	G	S	L	H	T	F	L	N	A	F	T	Y	P	D	R	T	C	Y	P	V	A	S	T	N	T	K	D	F	Y	N	L	V	D	V	Y	L	D	A	V	F	F	P	K	C	V	D	D	A	H	T	F	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B	T	T	B		S	S																					S	S									S	S																	S	B	G	G	G	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	G	W	H	Y	E	L	N	D	P	S	E	D	I	S	Y	K	G	V	V	F	N	E	X	K	G	V	Y	S	Q	P	D	N	I	L	G	R	I	A	Q	Q	A	L	S	P	E	N	T	Y	G	V	D	S	G	G	D	P	K	D	I	P	N	L	T	F	E	E	F	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T						S		T	T	S																T	T	S															T	T	S	G	G	G	S		T	T			T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	H	R	Q	Y	Y	H	P	S	N	A	R	I	W	F	Y	G	D	D	D	P	V	H	R	L	R	V	L	S	E	Y	L	D	X	F	E	A	S	P	S	P	N	S	S	K	I	K	F	Q	K	L	F	S	E	P	V	R	L	V	E	K	Y	P	A	G	R	D	G	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	G	G	G								S	S														T	T					S					S									S	S												S	S	S		G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	K	K	H	X	L	C	V	N	W	L	L	S	E	K	P	L	D	L	Q	T	Q	L	A	L	G	F	L	D	H	L	X	L	G	T	P	A	S	P	L	R	K	I	L	L	E	S	G	L	G	E	A	L	V	S	S	G	L	S	D	E	L	L	Q	P	Q	F	G	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G												S	S																			S	S	T	T	S									T	T	S		S				S						S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	K	G	V	S	E	E	N	V	Q	K	V	E	E	L	I	X	D	T	L	K	K	L	A	E	E	G	F	D	N	D	A	V	E	A	S	X	N	T	I	E	F	S	L	R	E	N	N	T	G	S	F	P	R	G	L	S	L	X	L	Q	S	I	S	K	W	I	Y	D	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G																																										T	T	S															T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	P	F	E	P	L	K	Y	T	E	P	L	K	A	L	K	T	R	I	A	E	E	G	S	K	A	V	F	S	P	L	I	E	K	L	I	L	N	N	S	H	R	V	T	I	E	X	Q	P	D	P	E	K	A	T	Q	E	E	V	E	E	K	N	I	L	E	K	V	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	G	G	G																														T	T	T													T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	X	T	E	E	D	L	A	E	L	A	R	A	T	E	E	L	K	L	K	Q	E	T	P	D	P	P	E	A	L	R	C	V	P	S	L	N	L	G	D	I	P	K	E	P	T	Y	V	P	T	E	V	G	D	I	N	G	V	K	V	L	R	H	D	L	F	T	N	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																				T	S								T	T	S					G	G	G	S		S	S											S	S	S	S										S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	Y	T	E	V	V	F	D	I	G	S	L	K	H	E	L	L	P	L	V	P	L	F	C	Q	S	L	L	E	X	G	T	K	D	L	T	F	V	Q	L	N	Q	L	I	G	R	K	T	G	G	I	S	V	Y	P	L	T	S	S	V	R	G	K	D	E	P	C	S	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S		T	T	T	G	G	G											S			S	S	S													S	S												T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	V	R	G	K	S	X	A	G	R	A	D	D	L	F	N	L	X	N	C	L	L	Q	E	V	Q	F	T	D	Q	Q	R	F	K	Q	F	V	S	Q	S	R	A	R	X	E	N	R	L	R	G	S	G	H	G	I	A	A	A	R	X	D	A	X	L	N	I	A	G	W	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G																	S																																				T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	E	Q	X	G	G	L	S	Y	L	E	F	L	H	T	L	E	K	K	V	D	E	D	W	E	G	I	S	S	S	L	E	E	I	R	R	S	L	L	A	R	N	G	C	I	V	N	X	T	A	D	G	K	S	L	T	N	V	E	K	S	V	A	K	F	L	D	L	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																																			S	T	T																									T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	N	P	S	G	G	L	V	T	W	D	G	R	L	P	L	R	N	E	A	I	V	I	P	T	Q	V	N	Y	V	G	K	A	G	N	I	Y	S	T	G	Y	E	L	D	G	S	A	Y	V	I	S	K	H	I	S	N	T	W	L	W	D	R	V	R	V	S	G	G	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S		S																	S		S	S	B								G	G	G	G	T					T												T						T	T	T	T	T			S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	G	G	F	C	D	F	D	S	H	S	G	V	F	S	Y	L	S	Y	R	D	P	N	L	L	K	T	L	D	I	Y	D	G	T	G	D	F	L	R	G	L	D	V	D	Q	E	T	L	T	K	A	I	I	G	T	I	G	D	V	D	S	Y	Q	L	P	D	A	K	G	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T								S	B	S		S									T							T																				T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.
Sequence	S	L	L	R	H	L	L	G	V	T	D	E	E	R	Q	R	K	R	E	E	I	L	T	T	S	L	K	D	F	K	D	F	A	Q	A	I	D	V	V	R	D	K	G	V	A	V	A	V	A	S	A	E	D	I	D	A	A	N	N	E	R	S	N	F	F	E	V	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T															T																																						T	T	T		S

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PDB structure

FASTA sequence

Hidden Markov model

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