Fold library entry viewer: c1sqpA_

Added to library: Tue Mar 16 12:44:11 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	A	T	Y	A	Q	A	L	Q	S	V	P	E	T	Q	V	S	Q	L	D	N	G	L	R	V	A	S	E	Q	S	S	Q	P	T	C	T	V	G	V	W	I	D	A	G	S	R	Y	E	S	E	K	N	N	G	A	G	Y	F	V	E	H	L	A	F	K	G	T	K	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S									T	T	S									S		S									S		S	S	T	T			S	T	T	T	T									T	T	S		B	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	G	N	A	L	E	K	E	V	E	S	M	G	A	H	L	N	A	Y	S	T	R	E	H	T	A	Y	Y	I	K	A	L	S	K	D	L	P	K	A	V	E	L	L	A	D	I	V	Q	N	C	S	L	E	D	S	Q	I	E	K	E	R	D	V	I	L	Q	E	L	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										T									S	S										G	G	G															B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	D	T	S	M	R	D	V	V	F	N	Y	L	H	A	T	A	F	Q	G	T	P	L	A	Q	S	V	E	G	P	S	E	N	V	R	K	L	S	R	A	D	L	T	E	Y	L	S	R	H	Y	K	A	P	R	M	V	L	A	A	A	G	G	L	E	H	R	Q	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T															T	T	T	S	G	G	G	S		S	S																						S		G	G	G								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	A	Q	K	H	F	S	G	L	S	G	T	Y	D	E	D	A	V	P	T	L	S	P	C	R	F	T	G	S	Q	I	C	H	R	E	D	G	L	P	L	A	H	V	A	I	A	V	E	G	P	G	W	A	H	P	D	N	V	A	L	Q	V	A	N	A	I	I	G	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			S		S	S		S	S	S																				T	T	S	S	S												T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	C	T	Y	G	G	G	A	H	L	S	S	P	L	A	S	I	A	A	T	N	K	L	C	Q	S	F	Q	T	F	N	I	C	Y	A	D	T	G	L	L	G	A	H	F	V	C	D	H	M	S	I	D	D	M	M	F	V	L	Q	G	Q	W	M	R	L	C	T	S	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S		G	G	G		S	S									T	T			S										T	T												G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	S	E	V	L	R	G	K	N	L	L	R	N	A	L	V	S	H	L	D	G	T	T	P	V	C	E	D	I	G	R	S	L	L	T	Y	G	R	R	I	P	L	A	E	W	E	S	R	I	A	E	V	D	A	R	V	V	R	E	V	C	S	K	Y	F	Y	D	Q	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S		S															T	S	S													T														T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Sequence	A	V	A	G	F	G	P	I	E	Q	L	P	D	Y	N	R	I	R	S	G	M	F	W	L	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T	T	S									T	T	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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