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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3amjB_

Fold library idPDB HeaderMoleculeTitle
c3amjB_PDB header: hydrolaseChain: B: PDB Molecule: zinc peptidase inactive subunit;PDBTitle: the crystal structure of the heterodimer of m16b peptidase from2 sphingomonas sp. a1


Added to library: Sat Feb 12 09:04:41 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AIKIEHWTAPSGAQVYYVENRTLPMLDVQVDFDAGSAREPADQVGVASMTASLMDAGTGSGKSALDENAI
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Known secondary structure (DSSP)




TTS


SSSS
SGGGS
TTSTTTGGG
STTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ADRLADIGARLGGGAEADRASFSLRVLSSPAERNSALTILRDILAHPTFPAPVLERERARAIAGLREAQT
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Known secondary structure (DSSP) TT

SS
SS
B


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QPGSILGRRFTELAYGKHPYGHVSSVATLQKISRDQLVSFHRTHYVARTAVVTLVGDITRAEAETIAQQL
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Known secondary structure (DSSP) STTSGGG





S
TTS
S

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence TADLPAGATLPPLPDPAMPRATVERIANPATQAHIAIGMPTLKRGDPDFFPLVVGNYALGGGGFESRLMK
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Known secondary structure (DSSP) TTTS

















SSSBTT
TTTTSGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIRDKRGLSYGAYSYFSPQKSMGLFQIGFETRAEKADEAVQVANDTLDAFLREGPTDAELQAAKDNLING
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Known secondary structure (DSSP) TTTT



BSS
STT


T
 .........360.........370.........380.........390.........400.........410....
Sequence FALRLDSNAKILGQVAVIGYYGLPLDYLDHYTERVQAVTVEQVREAFARHVKRENLITVVVGGK
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Known secondary structure (DSSP) SGGGGSSTT

TTTTTST



GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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