Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	A	F	P	E	T	F	L	W	G	G	A	T	A	A	N	Q	V	E	G	A	W	Q	E	D	G	K	G	I	S	T	S	D	L	Q	P	H	G	V	M	G	K	M	E	P	R	I	L	G	K	E	N	I	K	D	V	A	I	D
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?																				?															?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		F	Y	H	R	Y	P	E	D	I	A	L	F	A	E	M	G	F	T	C	L	R	I	S	I	A	W	A	R	I	F	P	Q	G	D	E	V	E	P	N	E	A	G	L	A	F	Y	D	R	L	F	D	E	M	A	Q	A	G	I	K	P
Secondary structure
SS confidence
Disorder																																				?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		L	V	T	L	S	H	Y	E	M	P	Y	G	L	V	K	N	Y	G	G	W	A	N	R	A	V	I	D	H	F	E	H	Y	A	R	T	V	F	T	R	Y	Q	H	K	V	A	L	W	L	T	F	N	E	I	N	M	S	L	H	A	P
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		F	T	G	V	G	L	A	E	E	S	G	E	A	E	V	Y	Q	A	I	H	H	Q	L	V	A	S	A	R	A	V	K	A	C	H	S	L	L	P	E	A	K	I	G	N	M	L	L	G	G	L	V	Y	P	L	T	C	Q	P	Q	D
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		M	L	Q	A	M	E	E	N	R	R	W	M	F	F	G	D	V	Q	A	R	G	Q	Y	P	G	Y	M	Q	R	F	F	R	D	H	N	I	T	I	E	M	T	E	S	D	A	E	D	L	K	H	T	V	D	F	I	S	F	S	Y	Y
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		M	T	G	C	V	S	H	D	E	S	I	N	K	N	A	Q	G	N	I	L	N	M	I	P	N	P	H	L	K	S	S	E	W	G	W	Q	I	D	P	V	G	L	R	V	L	L	N	T	L	W	D	R	Y	Q	K	P	L	F	I	V
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		E	N	G	L	G	A	K	D	S	V	E	A	D	G	S	I	Q	D	D	Y	R	I	A	Y	L	N	D	H	L	V	Q	V	N	E	A	I	A	D	G	V	D	I	M	G	Y	T	S	W	G	P	I	D	L	V	S	A	S	H	S	Q
Secondary structure
SS confidence
Disorder								?	?	?	?	?	?		?																																											?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Sequence		M	S	K	R	Y	G	F	I	Y	V	D	R	D	D	N	G	E	G	S	L	T	R	T	R	K	K	S	F	G	W	Y	A	E	V	I	K	T	R	G	L	S	L	K	K	I	T	I	K	A	P
Secondary structure
SS confidence
Disorder																		?	?	?																										?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1qox chain A Region: 1 - 462 Aligned: 445 Modelled: 462 Confidence: 100.0% Identity: 35% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: Family 1 of glycosyl hydrolase Phyre2 PDB 3pn8 chain A Region: 3 - 462 Aligned: 460 Modelled: 459 Confidence: 100.0% Identity: 50% PDB header:hydrolase Chain: A: PDB Molecule:putative phospho-beta-glucosidase; PDBTitle: the crystal structure of 6-phospho-beta-glucosidase from streptococcus2 mutans ua159 Phyre2 PDB 2j78 chain A domain 1 Region: 1 - 461 Aligned: 438 Modelled: 460 Confidence: 100.0% Identity: 34% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: Family 1 of glycosyl hydrolase Phyre2 PDB 3qom chain A Region: 2 - 463 Aligned: 458 Modelled: 458 Confidence: 100.0% Identity: 51% PDB header:hydrolase Chain: A: PDB Molecule:6-phospho-beta-glucosidase; PDBTitle: crystal structure of 6-phospho-beta-glucosidase from lactobacillus2 plantarum Phyre2 PDB 2xhy chain D Region: 3 - 462 Aligned: 442 Modelled: 460 Confidence: 100.0% Identity: 54% PDB header:hydrolase Chain: D: PDB Molecule:6-phospho-beta-glucosidase bgla; PDBTitle: crystal structure of e.coli bgla Phyre2 PDB 3fiy chain A Region: 2 - 461 Aligned: 437 Modelled: 460 Confidence: 100.0% Identity: 33% PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of bglb Phyre2 PDB 1e4i chain A Region: 1 - 464 Aligned: 444 Modelled: 463 Confidence: 100.0% Identity: 33% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: Family 1 of glycosyl hydrolase Phyre2 PDB 3ahx chain C Region: 3 - 458 Aligned: 436 Modelled: 456 Confidence: 100.0% Identity: 34% PDB header:hydrolase Chain: C: PDB Molecule:beta-glucosidase a; PDBTitle: crystal structure of beta-glucosidase a from bacterium clostridium2 cellulovorans Phyre2 PDB 2j75 chain A Region: 1 - 461 Aligned: 436 Modelled: 460 Confidence: 100.0% Identity: 34% PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase a; PDBTitle: beta-glucosidase from thermotoga maritima in complex with2 noeuromycin Phyre2 PDB 2dga chain A Region: 3 - 459 Aligned: 444 Modelled: 457 Confidence: 100.0% Identity: 31% PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of hexameric beta-glucosidase in wheat Phyre2 PDB 1gnx chain A Region: 3 - 461 Aligned: 441 Modelled: 458 Confidence: 100.0% Identity: 35% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: Family 1 of glycosyl hydrolase Phyre2 PDB 1v08 chain A Region: 1 - 457 Aligned: 445 Modelled: 457 Confidence: 100.0% Identity: 29% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: Family 1 of glycosyl hydrolase Phyre2 PDB 2rgm chain A Region: 2 - 457 Aligned: 441 Modelled: 456 Confidence: 100.0% Identity: 29% PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: rice bglu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase Phyre2 PDB 3gno chain A Region: 2 - 457 Aligned: 442 Modelled: 456 Confidence: 100.0% Identity: 32% PDB header:hydrolase Chain: A: PDB Molecule:os03g0212800 protein; PDBTitle: crystal structure of a rice os3bglu6 beta-glucosidase Phyre2 PDB 3ai0 chain A Region: 1 - 463 Aligned: 447 Modelled: 457 Confidence: 100.0% Identity: 30% PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of beta-glucosidase from termite neotermes2 koshunensis in complex with para-nitrophenyl-beta-d-glucopyranoside Phyre2 PDB 2z1s chain A Region: 3 - 460 Aligned: 437 Modelled: 458 Confidence: 100.0% Identity: 29% PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase b; PDBTitle: beta-glucosidase b from paenibacillus polymyxa complexed2 with cellotetraose Phyre2 PDB 3ptk chain B Region: 2 - 456 Aligned: 443 Modelled: 455 Confidence: 100.0% Identity: 30% PDB header:hydrolase Chain: B: PDB Molecule:beta-glucosidase os4bglu12; PDBTitle: the crystal structure of rice (oryza sativa l.) os4bglu12 Phyre2 PDB 1e4m chain M Region: 2 - 456 Aligned: 441 Modelled: 455 Confidence: 100.0% Identity: 27% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: Family 1 of glycosyl hydrolase Phyre2 PDB 3u57 chain A Region: 1 - 456 Aligned: 444 Modelled: 451 Confidence: 100.0% Identity: 28% PDB header:hydrolase Chain: A: PDB Molecule:raucaffricine-o-beta-d-glucosidase; PDBTitle: structures of alkaloid biosynthetic glucosidases decode substrate2 specificity Phyre2 PDB 1v02 chain F Region: 3 - 455 Aligned: 441 Modelled: 449 Confidence: 100.0% Identity: 33% PDB header:hydrolase Chain: F: PDB Molecule:dhurrinase; PDBTitle: crystal structure of the sorghum bicolor dhurrinase 1 Phyre2 1 d1qoxa_ 2 c3pn8A_ 3 d2j78a1 4 c3qomA_ 5 c2xhyD_ 6 c3fiyA_ 7 d1e4ia_ 8 c3ahxC_ 9 c2j75A_ 10 c2dgaA_ 11 d1gnxa_ 12 d1v08a_ 13 c2rgmA_ 14 c3gnoA_ 15 c3ai0A_ 16 c2z1sA_ 17 c3ptkB_ 18 d1e4mm_ 19 c3u57A_ 20 c1v02F_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336