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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1hjsa_

Fold library idFoldSuperfamilyFamily
d1hjsa_TIM beta/alpha-barrel(Trans)glycosidasesbeta-glycanases


Added to library: Tue Mar 16 13:58:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALTYRGVDWSSVVVEERAGVSYKNTNGNAQPLENILAANGVNTVRQRVWVNPADGNYNLDYNIAIAKRAK
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Known secondary structure (DSSP)

S
TTTT


B
TTS
B

TT


SS
TT
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGL
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Known secondary structure (DSSP) TT


SSS

BTTB
B

TT


STT


SSSSGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGTLELSDFDMMG
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Known secondary structure (DSSP) TBTTTT
TS

SS

S
TT
TTSSS
GGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence VSFYPFYSSSATLSALKSSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNV
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Known secondary structure (DSSP)

SSS
TT







SB
SS
SS


GGGTTS
SS
 .........290.........300.........310.........320.........330..
Sequence ANIVSSVSRGVGLFYWEPAWIHNANLGSSCADNTMFSQSGQALSSLSVFQRI
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Known secondary structure (DSSP) TSTT
TT
GGGTTTTSSSSB

SB
TTSBB
GGGGGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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