PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3pzqA_

Fold library id	PDB Header	Molecule	Title
c3pzqA_	PDB header: hydrolase	Chain: A: PDB Molecule: mannan endo-1,4-beta-mannosidase. glycosyl hydrolase family	PDBTitle: structure of the hyperthermostable endo-1,4-beta-d-mannanase from2 thermotoga petrophila rku-1 with maltose and glycerol

Links to external resources
Added to library: Sat Dec 31 16:42:43 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F R F I G S N N Y Y M H Y K S N R M I D S V L E S A R D M G I K V L R I W G F L D G E S Y C R D K N T Y M H P E P G V F G V P E G I S N A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S
T
B S T S B S B T T B
S S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N G F E R L D Y T I A K A K E L G I K L I I V L V N N W D D F G G M N Q Y V R W F G G T H H D D F Y R D E R I K E E Y K K Y V S F L I N H V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B S S S T T S T T
S S G G G G G T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N V Y T G V P Y R E E P T I M A W E L A N E L R C E T D K S G N T L V E W V K E M S S Y I K S L D P N H L V A V G D E G F F S N Y E G F K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
B G G G
T T S
B T
T T
T T S
S S S
B
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Y G G E A E W A Y N G W S G V D W K K L L S I E T V D F G T F H L Y P S H W G V S P E N Y A Q W G A K W I E D H I K I A K E I G K P V V L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S G G G T B T T T S
T
T T
S
T T T T T
G G G T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence E Y G I P K S A P V N R T A I Y R L W N D L V Y D L G G D G A M F W M L A G I G E G S D R D E R G Y Y P D Y D G F R I V N D D S P E A E L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
T
S S
B
B
B T T B
T T S B
S S S
B
S S S S

. . . . . . .

Sequence R E Y A K L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	R	F	I	G	S	N	N	Y	Y	M	H	Y	K	S	N	R	M	I	D	S	V	L	E	S	A	R	D	M	G	I	K	V	L	R	I	W	G	F	L	D	G	E	S	Y	C	R	D	K	N	T	Y	M	H	P	E	P	G	V	F	G	V	P	E	G	I	S	N	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		T	T	T	S																T											B	S								T			S	B	S	B	T	T	B		S	S		T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	F	E	R	L	D	Y	T	I	A	K	A	K	E	L	G	I	K	L	I	I	V	L	V	N	N	W	D	D	F	G	G	M	N	Q	Y	V	R	W	F	G	G	T	H	H	D	D	F	Y	R	D	E	R	I	K	E	E	Y	K	K	Y	V	S	F	L	I	N	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T									B	S	S	S	T	T	S									T	T		S	S	G	G	G	G	G	T																			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	V	Y	T	G	V	P	Y	R	E	E	P	T	I	M	A	W	E	L	A	N	E	L	R	C	E	T	D	K	S	G	N	T	L	V	E	W	V	K	E	M	S	S	Y	I	K	S	L	D	P	N	H	L	V	A	V	G	D	E	G	F	F	S	N	Y	E	G	F	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T			B	G	G	G		T	T						S		B	T				T	T		T	T	S																			S	S	S											B			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	G	G	E	A	E	W	A	Y	N	G	W	S	G	V	D	W	K	K	L	L	S	I	E	T	V	D	F	G	T	F	H	L	Y	P	S	H	W	G	V	S	P	E	N	Y	A	Q	W	G	A	K	W	I	E	D	H	I	K	I	A	K	E	I	G	K	P	V	V	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		S	G	G	G	T	B	T	T	T	S								T		T	T			S							T	T	T	T	T			G	G	G																				T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	Y	G	I	P	K	S	A	P	V	N	R	T	A	I	Y	R	L	W	N	D	L	V	Y	D	L	G	G	D	G	A	M	F	W	M	L	A	G	I	G	E	G	S	D	R	D	E	R	G	Y	Y	P	D	Y	D	G	F	R	I	V	N	D	D	S	P	E	A	E	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S	S																	T		S					S		B			B		B	T	T	B			T	T	S	B				S	S	S			B		S	S	S	S
	.	.	.	.	.	.	.
Sequence	R	E	Y	A	K	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)