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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1vbua1

Fold library idFoldSuperfamilyFamily
d1vbua1TIM beta/alpha-barrel(Trans)glycosidasesbeta-glycanases


Added to library: Tue Mar 16 12:02:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSLRELAEKLNIYIGFAAINNFWSLSDAEKYMEVARREFNILTPENQMKWDTIHPERDRYNFTPAEKHVE
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Known secondary structure (DSSP)

TT

TTGGGSTT
SSSTTS

BTTB


 .........80.........90.........100.........110.........120.........130.........140
Sequence FAEENDMIVHGHTLVWHNQLPGWITGREWTKEELLNVLEDHIKTVVSHFKGRVKIWDVVNEAVSDSGTYR
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Known secondary structure (DSSP) TT

SSS

TS


TTTT

S
B
TTSSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence ESVWYKTIGPEYIEKAFRWAKEADPDAILIYNDYSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHID
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Known secondary structure (DSSP)


T
TTSSS
SSSSTT





 .........220.........230.........240.........250.........260.........270.........280
Sequence YRGLNYDSFRRNLERFAKLGLQIYITEMDVRIPLSGSEEYYLKKQAEVCAKIFDICLDNPAVKAIQFWGF
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Known secondary structure (DSSP) TT


TTT
SSS
TSTTS
S
 .........290.........300.........310.........320....
Sequence TDKYSWVPGFFKGYGKALLFDENYNPKPCYYAIKEVLEKKIEER
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Known secondary structure (DSSP) BTTS
SSTT

SSB
TTS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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