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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d2pb1a1

Fold library idFoldSuperfamilyFamily
d2pb1a1TIM beta/alpha-barrel(Trans)glycosidasesbeta-glycanases


Added to library: Tue Mar 16 13:16:05 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AWDYDNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWIT
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Known secondary structure (DSSP)


TTT


TTSSS

TTT
GGGTGGG
BTTB
TTS

S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDN
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Known secondary structure (DSSP) TT

GGGT


TT





TT

TT
SS

GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGLRDSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQ
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Known secondary structure (DSSP) GSSTT


TTSTTSSGGGTTTS
S


GGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TGSVTPVIIHDAFQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESH
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Known secondary structure (DSSP) TT




TT

TTTTTTSS
GGGT

S

S
SST

T
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence WNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQLDAFEY
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Known secondary structure (DSSP)

S
SS

STTTT
TT


TTBT
STT

B


SGGGSSGGG

T
 .........360.........370.........380.........390....
Sequence TGGWVFWSWKTENAPEWSFQTLTYNGLFPQPVTDRQFPNQCGFH
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Known secondary structure (DSSP) TTS
S

SS
GGG
TT
S
SSTT

SSTTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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