Email l.a.kelley@imperial.ac.uk Description P15373 Date Thu Jan 5 11:34:46 GMT 2012 Unique Job ID 192fa70646c8c03e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2w1tB_ 98.6 21 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: crystal structure of b. subtilis spovt 2 c2l66B_ 98.2 29 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 3 c2ro5B_ 97.5 23 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: rdc-refined solution structure of the n-terminal dna2 recognition domain of the bacillus subtilis transition-3 state regulator spovt 4 d2fy9a1 97.2 26 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 5 d1yfba1 97.1 21 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 6 c2glwA_ 97.0 27 PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii 7 d1ub4c_ 95.6 22 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 8 d1mvfd_ 94.9 24 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 9 d1n0ea_ 90.6 14 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Hypothetical protein MraZ 10 c1n0fF_ 90.4 14 PDB header:biosynthetic protein Chain: F: PDB Molecule:protein mraz; PDBTitle: crystal structure of a cell division and cell wall2 biosynthesis protein upf0040 from mycoplasma pneumoniae:3 indication of a novel fold with a possible new conserved4 sequence motif 11 d2d9ra1 84.6 32 Fold:Double-split beta-barrel Superfamily:AF2212/PG0164-like Family:PG0164-like 12 d1ylea1 83.7 14 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:AstA-like 13 d2vbua1 78.2 41 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like 14 c2c45F_ 76.0 20 PDB header:lyase Chain: F: PDB Molecule:aspartate 1-decarboxylase precursor; PDBTitle: native precursor of pyruvoyl dependent aspartate2 decarboxylase 15 c3o27B_ 73.8 29 PDB header:dna binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: the crystal structure of c68 from the hybrid virus-plasmid pssvx 16 d1ppya_ 71.6 18 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Pyruvoyl dependent aspartate decarboxylase, ADC 17 c1pt1B_ 71.6 16 PDB header:lyase Chain: B: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: unprocessed pyruvoyl dependent aspartate decarboxylase with histidine2 11 mutated to alanine 18 c2l55A_ 67.6 27 PDB header:metal binding protein Chain: A: PDB Molecule:silb,silver efflux protein, mfp component of the three PDBTitle: solution structure of the c-terminal domain of silb from cupriavidus2 metallidurans 19 c1zeqX_ 67.1 19 PDB header:metal binding protein Chain: X: PDB Molecule:cation efflux system protein cusf; PDBTitle: 1.5 a structure of apo-cusf residues 6-88 from escherichia2 coli 20 c2pjhB_ 61.1 16 PDB header:transport protein Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: strctural model of the p97 n domain- npl4 ubd complex 21 d2p19a1 not modelled 55.5 17 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:UTRA domain 22 c2kdoA_ not modelled 49.4 18 PDB header:rna binding protein Chain: A: PDB Molecule:ribosome maturation protein sbds; PDBTitle: structure of the human shwachman-bodian-diamond syndrome protein, sbds 23 d2c4ka1 not modelled 48.4 11 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 24 d2fa1a1 not modelled 48.3 14 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:UTRA domain 25 c3ll7A_ not modelled 47.0 15 PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of putative methyltransferase pg_1098 from2 porphyromonas gingivalis w83 26 d1u9ya1 not modelled 45.9 16 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 27 d2ikka1 not modelled 44.2 17 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:UTRA domain 28 c2ra5A_ not modelled 44.0 19 PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of the putative transcriptional regulator2 from streptomyces coelicolor 29 d2ra5a1 not modelled 44.0 19 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:UTRA domain 30 d1cz5a1 not modelled 42.1 20 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 31 d3cnva1 not modelled 41.8 24 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:UTRA domain 32 c1zc1A_ not modelled 41.5 24 PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites 33 d2pkha1 not modelled 40.8 12 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:UTRA domain 34 c3pjyB_ not modelled 40.5 25 PDB header:transcription regulator Chain: B: PDB Molecule:hypothetical signal peptide protein; PDBTitle: crystal structure of a putative transcription regulator (r01717) from2 sinorhizobium meliloti 1021 at 1.55 a resolution 35 c3m7aA_ not modelled 39.7 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of saro_0823 (yp_496102.1) a protein of2 unknown function from novosphingobium aromaticivorans dsm3 12444 at 1.22 a resolution 36 d3bwga2 not modelled 36.8 20 Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:UTRA domain 37 d1dkua1 not modelled 35.4 8 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 38 c1cz5A_ not modelled 34.8 18 PDB header:hydrolase Chain: A: PDB Molecule:vcp-like atpase; PDBTitle: nmr structure of vat-n: the n-terminal domain of vat (vcp-2 like atpase of thermoplasma) 39 d1vlfm1 not modelled 33.4 28 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 40 c1zzvA_ not modelled 33.4 15 PDB header:membrane protein, metal transport Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca; PDBTitle: solution nmr structure of the periplasmic signaling domain2 of the outer membrane iron transporter feca from3 escherichia coli. 41 d2axti1 not modelled 32.5 36 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein I, PsbI Family:PsbI-like 42 c2yujA_ not modelled 31.3 16 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 43 c2ki8A_ not modelled 30.5 28 PDB header:oxidoreductase Chain: A: PDB Molecule:tungsten formylmethanofuran dehydrogenase, PDBTitle: solution nmr structure of tungsten formylmethanofuran2 dehydrogenase subunit d from archaeoglobus fulgidus,3 northeast structural genomics consortium target att7 44 c2k4vA_ not modelled 30.5 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pa1076; PDBTitle: solution structure of uncharacterized protein pa1076 from2 pseudomonas aeruginosa. northeast structural genomics3 consortium (nesg) target pat3, ontario center for4 structural proteomics target pa1076 . 45 d1zq1a1 not modelled 28.3 14 Fold:Sm-like fold Superfamily:GatD N-terminal domain-like Family:GatD N-terminal domain-like 46 d1we0a1 not modelled 27.6 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 47 d2fug21 not modelled 24.8 24 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like 48 d2f23a2 not modelled 24.6 21 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 49 c2jwlB_ not modelled 24.6 14 PDB header:membrane protein Chain: B: PDB Molecule:protein tolr; PDBTitle: solution structure of periplasmic domain of tolr from h.2 influenzae with saxs data 50 c3lheA_ not modelled 23.7 23 PDB header:transcription regulator Chain: A: PDB Molecule:gntr family transcriptional regulator; PDBTitle: the crystal structure of the c-terminal domain of a gntr2 family transcriptional regulator from bacillus anthracis3 str. sterne 51 d1yexa1 not modelled 23.4 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 52 c2oqkA_ not modelled 23.4 14 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 53 c1q6xA_ not modelled 23.0 9 PDB header:transferase Chain: A: PDB Molecule:choline o-acetyltransferase; PDBTitle: crystal structure of rat choline acetyltransferase 54 d1u0la1 not modelled 23.0 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 55 d1zvvj1 not modelled 22.1 15 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 56 c2c4kD_ not modelled 22.0 11 PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) 57 c3hvzB_ not modelled 21.7 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the tgs domain of the clolep_03100 protein from2 clostridium leptum, northeast structural genomics consortium target3 qlr13a 58 d1qr5a_ not modelled 21.7 13 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 59 d2ifea_ not modelled 21.6 14 Fold:IF3-like Superfamily:Translation initiation factor IF3, C-terminal domain Family:Translation initiation factor IF3, C-terminal domain 60 d1ka5a_ not modelled 21.5 13 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 61 c1t95A_ not modelled 21.5 12 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein af0491; PDBTitle: crystal structure of the shwachman-bodian-diamond syndrome2 protein orthologue from archaeoglobus fulgidus 62 d3d31a1 not modelled 20.8 18 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 63 c3hfiA_ not modelled 20.4 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative regulator; PDBTitle: the crystal structure of the putative regulator from escherichia coli2 cft073 64 c3dahB_ not modelled 20.3 11 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from2 burkholderia pseudomallei 65 c3ho6B_ not modelled 19.9 16 PDB header:toxin Chain: B: PDB Molecule:toxin a; PDBTitle: structure-function analysis of inositol hexakisphosphate-2 induced autoprocessing in clostridium difficile toxin a 66 c3f8lC_ not modelled 19.7 11 PDB header:transcription Chain: C: PDB Molecule:hth-type transcriptional repressor phnf; PDBTitle: crystal structure of the effector domain of phnf from mycobacterium2 smegmatis 67 c2wbmA_ not modelled 19.4 16 PDB header:rna-binding protein Chain: A: PDB Molecule:ribosome maturation protein sdo1 homolog; PDBTitle: crystal structure of mthsbds, the homologue of the2 shwachman-bodian-diamond syndrome protein in the3 euriarchaeon methanothermobacter thermautotrophicus 68 c3ougA_ not modelled 19.4 10 PDB header:lyase Chain: A: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: crystal structure of cleaved l-aspartate-alpha-decarboxylase from2 francisella tularensis 69 d1mo1a_ not modelled 19.4 17 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 70 d1ptfa_ not modelled 19.2 15 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 71 d2hpra_ not modelled 18.8 17 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 72 c3bmbB_ not modelled 18.7 36 PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein 73 d1hr0w_ not modelled 18.6 35 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 74 d1y7qa1 not modelled 18.4 19 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:SCAN domain 75 d2jioa1 not modelled 17.6 16 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 76 d1jt8a_ not modelled 17.5 9 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 77 d1ihra_ not modelled 16.8 19 Fold:TolA/TonB C-terminal domain Superfamily:TolA/TonB C-terminal domain Family:TonB 78 d1g8ka1 not modelled 16.8 13 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 79 d2eifa2 not modelled 16.5 37 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 80 c3zvkG_ not modelled 16.5 13 PDB header:antitoxin/toxin/dna Chain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb; PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter 81 c3le1B_ not modelled 16.4 11 PDB header:transferase Chain: B: PDB Molecule:phosphotransferase system, hpr-related proteins; PDBTitle: crystal structure of apohpr monomer from thermoanaerobacter2 tengcongensis 82 c3lotC_ not modelled 16.3 39 PDB header:structure genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function (np_070038.1) from2 archaeoglobus fulgidus at 1.89 a resolution 83 c1u9yD_ not modelled 16.3 16 PDB header:transferase Chain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii 84 c3i4oA_ not modelled 16.1 26 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis 85 c3efhB_ not modelled 15.9 8 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 86 d1kqfa1 not modelled 15.8 12 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 87 c1h0hA_ not modelled 15.5 13 PDB header:dehydrogenase Chain: A: PDB Molecule:formate dehydrogenase (large subunit); PDBTitle: tungsten containing formate dehydrogenase from2 desulfovibrio gigas 88 d1kbla3 not modelled 15.3 17 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Pyruvate phosphate dikinase, N-terminal domain 89 d2iv2x1 not modelled 15.2 10 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 90 c2pn0D_ not modelled 14.6 38 PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea 91 c1dkrB_ not modelled 14.6 8 PDB header:transferase Chain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase; PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation. 92 d1h9ma2 not modelled 14.5 32 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 93 d1t9ha1 not modelled 14.5 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 94 c3lpnB_ not modelled 14.5 21 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of the phosphoribosylpyrophosphate (prpp) synthetase2 from thermoplasma volcanium in complex with an atp analog (ampcpp). 95 d2nzul1 not modelled 14.5 18 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 96 c3e02A_ not modelled 14.4 28 PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849; PDBTitle: crystal structure of a duf849 family protein (bxe_c0271) from2 burkholderia xenovorans lb400 at 1.90 a resolution 97 c1h9mB_ not modelled 14.3 27 PDB header:binding protein Chain: B: PDB Molecule:molybdenum-binding-protein; PDBTitle: two crystal structures of the cytoplasmic molybdate-binding2 protein modg suggest a novel cooperative binding mechanism3 and provide insights into ligand-binding specificity.4 peg-grown form with molybdate bound 98 c1vlfQ_ not modelled 14.2 28 PDB header:oxidoreductase Chain: Q: PDB Molecule:pyrogallol hydroxytransferase large subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici complexed3 with inhibitor 1,2,4,5-tetrahydroxy-benzene 99 d2etna2 not modelled 13.9 21 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain