Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP36677
DateThu Jan 5 11:53:41 GMT 2012
Unique Job ID114a3d16760ee23f

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2rfpA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:putative ntp pyrophosphohydrolase;
PDBTitle: crystal structure of putative ntp pyrophosphohydrolase2 (yp_001813558.1) from exiguobacterium sibiricum 255-15 at 1.74 a3 resolution
Confidence and coverage
Confidence: 75.8% Coverage: 42%
51 residues ( 42% of your sequence) have been modelled with 75.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
Secondary structure 



























SS confidence 



























































Disorder  ??














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   .........70.........80.........90.........100.........110.........120
Sequence  EQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIN
Secondary structure 












SS confidence 



























































Disorder 





































??????????










?
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   ..
Sequence  DN
Secondary structure 

SS confidence 

Disorder  ??
Disorder confidence 

 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2rfp chain A

3D model

Region: 10 - 71
Aligned: 51
Modelled: 60
Confidence: 75.8%
Identity: 24%
PDB header:hydrolase
Chain: A: PDB Molecule:putative ntp pyrophosphohydrolase;
PDBTitle: crystal structure of putative ntp pyrophosphohydrolase2 (yp_001813558.1) from exiguobacterium sibiricum 255-15 at 1.74 a3 resolution

Phyre2

PDB 1vgm chain B

3D model

Region: 8 - 69
Aligned: 61
Modelled: 62
Confidence: 46.4%
Identity: 16%
PDB header:transferase
Chain: B: PDB Molecule:378aa long hypothetical citrate synthase;
PDBTitle: crystal structure of an isozyme of citrate synthase from sulfolbus2 tokodaii strain7

Phyre2

PDB 1hw1 chain A domain 1

3D model

Region: 5 - 56
Aligned: 48
Modelled: 52
Confidence: 44.4%
Identity: 25%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: GntR-like transcriptional regulators

Phyre2

PDB 2r26 chain C

3D model

Region: 8 - 69
Aligned: 61
Modelled: 62
Confidence: 37.1%
Identity: 13%
PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: the structure of the ternary complex of carboxymethyl2 coenzyme a and oxalateacetate with citrate synthase from3 the thermophilic archaeonthermoplasma acidophilum

Phyre2

PDB 3ic7 chain A

3D model

Region: 8 - 56
Aligned: 45
Modelled: 49
Confidence: 36.8%
Identity: 9%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator of gntr family2 from bacteroides thetaiotaomicron

Phyre2

PDB 2wv0 chain H

3D model

Region: 3 - 56
Aligned: 47
Modelled: 54
Confidence: 34.4%
Identity: 21%
PDB header:transcription
Chain: H: PDB Molecule:hth-type transcriptional repressor yvoa;
PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis

Phyre2

PDB 1o7x chain A

3D model

Region: 8 - 69
Aligned: 61
Modelled: 62
Confidence: 34.0%
Identity: 11%
Fold: Citrate synthase
Superfamily: Citrate synthase
Family: Citrate synthase

Phyre2

PDB 1e2x chain A

3D model

Region: 5 - 56
Aligned: 48
Modelled: 52
Confidence: 33.4%
Identity: 25%
PDB header:transcriptional regulation
Chain: A: PDB Molecule:fatty acid metabolism regulator protein;
PDBTitle: fadr, fatty acid responsive transcription factor from e.2 coli

Phyre2

PDB 3neu chain A

3D model

Region: 3 - 56
Aligned: 50
Modelled: 50
Confidence: 30.0%
Identity: 16%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin1836 protein;
PDBTitle: the crystal structure of a functionally-unknown protein lin1836 from2 listeria innocua clip11262

Phyre2

PDB 1v4r chain A domain 1

3D model

Region: 8 - 56
Aligned: 45
Modelled: 49
Confidence: 28.7%
Identity: 22%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: GntR-like transcriptional regulators

Phyre2

PDB 2vcb chain A

3D model

Region: 21 - 63
Aligned: 40
Modelled: 43
Confidence: 28.4%
Identity: 30%
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase;
PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac

Phyre2

PDB 1iom chain A

3D model

Region: 5 - 73
Aligned: 66
Modelled: 69
Confidence: 27.7%
Identity: 15%
Fold: Citrate synthase
Superfamily: Citrate synthase
Family: Citrate synthase

Phyre2

PDB 3by6 chain C

3D model

Region: 1 - 56
Aligned: 52
Modelled: 56
Confidence: 26.4%
Identity: 12%
PDB header:transcription regulator
Chain: C: PDB Molecule:predicted transcriptional regulator;
PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni

Phyre2

PDB 1k3p chain A

3D model

Region: 8 - 69
Aligned: 62
Modelled: 62
Confidence: 25.2%
Identity: 19%
Fold: Citrate synthase
Superfamily: Citrate synthase
Family: Citrate synthase

Phyre2

PDB 3eet chain A

3D model

Region: 8 - 56
Aligned: 45
Modelled: 36
Confidence: 24.6%
Identity: 9%
PDB header:transcription regulator
Chain: A: PDB Molecule:putative gntr-family transcriptional regulator;
PDBTitle: crystal structure of putative gntr-family transcriptional2 regulator

Phyre2

PDB 3bwg chain A

3D model

Region: 8 - 56
Aligned: 45
Modelled: 49
Confidence: 22.8%
Identity: 13%
PDB header:transcription regulator
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk;
PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168

Phyre2

PDB 2p2w chain A

3D model

Region: 8 - 69
Aligned: 56
Modelled: 62
Confidence: 22.7%
Identity: 14%
PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from thermotoga maritima msb8

Phyre2

PDB 3edp chain B

3D model

Region: 3 - 56
Aligned: 48
Modelled: 54
Confidence: 22.6%
Identity: 21%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:lin2111 protein;
PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262

Phyre2

PDB 3tqn chain C

3D model

Region: 8 - 56
Aligned: 44
Modelled: 49
Confidence: 22.1%
Identity: 20%
PDB header:transcription
Chain: C: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: structure of the transcriptional regulator of the gntr family, from2 coxiella burnetii.

Phyre2

PDB 1a59 chain A

3D model

Region: 2 - 69
Aligned: 65
Modelled: 68
Confidence: 22.0%
Identity: 18%
Fold: Citrate synthase
Superfamily: Citrate synthase
Family: Citrate synthase

Phyre2
1

c2rfpA_
2

c1vgmB_
3

d1hw1a1
4

c2r26C_
5

c3ic7A_
6

c2wv0H_
7

d1o7xa_
8

c1e2xA_
9

c3neuA_
10

d1v4ra1
11

c2vcbA_
12

d1ioma_
13

c3by6C_
14

d1k3pa_
15

c3eetA_
16

c3bwgA_
17

c2p2wA_
18

c3edpB_
19

c3tqnC_
20

d1a59a_
21



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50



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56



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61



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71






Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2rfpA_



75.8 24 PDB header:hydrolase
Chain: A: PDB Molecule:putative ntp pyrophosphohydrolase;
PDBTitle: crystal structure of putative ntp pyrophosphohydrolase2 (yp_001813558.1) from exiguobacterium sibiricum 255-15 at 1.74 a3 resolution
2c1vgmB_



46.4 16 PDB header:transferase
Chain: B: PDB Molecule:378aa long hypothetical citrate synthase;
PDBTitle: crystal structure of an isozyme of citrate synthase from sulfolbus2 tokodaii strain7
3d1hw1a1



44.4 25 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:GntR-like transcriptional regulators
4c2r26C_



37.1 13 PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: the structure of the ternary complex of carboxymethyl2 coenzyme a and oxalateacetate with citrate synthase from3 the thermophilic archaeonthermoplasma acidophilum
5c3ic7A_



36.8 9 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator of gntr family2 from bacteroides thetaiotaomicron
6c2wv0H_



34.4 21 PDB header:transcription
Chain: H: PDB Molecule:hth-type transcriptional repressor yvoa;
PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis
7d1o7xa_



34.0 11 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
8c1e2xA_



33.4 25 PDB header:transcriptional regulation
Chain: A: PDB Molecule:fatty acid metabolism regulator protein;
PDBTitle: fadr, fatty acid responsive transcription factor from e.2 coli
9c3neuA_



30.0 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin1836 protein;
PDBTitle: the crystal structure of a functionally-unknown protein lin1836 from2 listeria innocua clip11262
10d1v4ra1



28.7 22 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:GntR-like transcriptional regulators
11c2vcbA_



28.4 30 PDB header:hydrolase
Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase;
PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac
12d1ioma_



27.7 15 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
13c3by6C_



26.4 12 PDB header:transcription regulator
Chain: C: PDB Molecule:predicted transcriptional regulator;
PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni
14d1k3pa_



25.2 19 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
15c3eetA_



24.6 9 PDB header:transcription regulator
Chain: A: PDB Molecule:putative gntr-family transcriptional regulator;
PDBTitle: crystal structure of putative gntr-family transcriptional2 regulator
16c3bwgA_



22.8 13 PDB header:transcription regulator
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk;
PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168
17c2p2wA_



22.7 14 PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from thermotoga maritima msb8
18c3edpB_



22.6 21 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:lin2111 protein;
PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262
19c3tqnC_



22.1 20 PDB header:transcription
Chain: C: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: structure of the transcriptional regulator of the gntr family, from2 coxiella burnetii.
20d1a59a_



22.0 18 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
21d1r9la_



not modelled 21.3 18 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
22c3tqgA_



not modelled 20.9 17 PDB header:transferase
Chain: A: PDB Molecule:2-methylcitrate synthase;
PDBTitle: structure of the 2-methylcitrate synthase (prpc) from coxiella2 burnetii
23c3o8jH_



not modelled 20.6 19 PDB header:transferase
Chain: H: PDB Molecule:2-methylcitrate synthase;
PDBTitle: crystal structure of 2-methylcitrate synthase (prpc) from salmonella2 typhimurium
24c2du9A_



not modelled 18.9 25 PDB header:transcription
Chain: A: PDB Molecule:predicted transcriptional regulators;
PDBTitle: crystal structure of the transcriptional factor from c.glutamicum
25c3fmsA_



not modelled 18.5 17 PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, gntr family;
PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator
26c2h12C_



not modelled 17.6 19 PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: structure of acetobacter aceti citrate synthase complexed2 with oxaloacetate and carboxymethyldethia coenzyme a (cmx)
27d1csca_



not modelled 15.9 13 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
28d1hc1a2



not modelled 15.8 21 Fold:Di-copper centre-containing domain
Superfamily:Di-copper centre-containing domain
Family:Hemocyanin middle domain
29d2fzta1



not modelled 15.7 41 Fold:Methionine synthase domain-like
Superfamily:TM0693-like
Family:TM0693-like
30c3hhsA_



not modelled 15.6 35 PDB header:oxidoreductase
Chain: A: PDB Molecule:phenoloxidase subunit 2;
PDBTitle: crystal structure of manduca sexta prophenoloxidase
31d3bwga1



not modelled 15.5 13 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:GntR-like transcriptional regulators
32d1llaa2



not modelled 13.9 15 Fold:Di-copper centre-containing domain
Superfamily:Di-copper centre-containing domain
Family:Hemocyanin middle domain
33d1bh9b_



not modelled 13.1 27 Fold:Histone-fold
Superfamily:Histone-fold
Family:TBP-associated factors, TAFs
34c2i9nA_



not modelled 12.8 70 PDB header:de novo protein
Chain: A: PDB Molecule:mhb4a peptide;
PDBTitle: design of bivalent miniprotein consisting of two2 independent elements, a b-hairpin peptide and a-helix3 peptide, tethered by four glycines
35c2i9oA_



not modelled 12.5 70 PDB header:de novo protein
Chain: A: PDB Molecule:mhb8a peptide;
PDBTitle: design of bivalent miniprotein consisting of two2 independent elements, a b-hairpin peptide and a-helix3 peptide, tethered by eight glycines
36d1e8ca2



not modelled 11.9 21 Fold:MurD-like peptide ligases, peptide-binding domain
Superfamily:MurD-like peptide ligases, peptide-binding domain
Family:MurCDEF C-terminal domain
37c3fkeB_



not modelled 11.5 40 PDB header:rna binding protein
Chain: B: PDB Molecule:polymerase cofactor vp35;
PDBTitle: structure of the ebola vp35 interferon inhibitory domain
38c2ibpB_



not modelled 11.4 15 PDB header:transferase
Chain: B: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from pyrobaculum aerophilum
39d2hs5a1



not modelled 11.2 17 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:GntR-like transcriptional regulators
40c1iq8B_



not modelled 11.1 26 PDB header:transferase
Chain: B: PDB Molecule:archaeosine trna-guanine transglycosylase;
PDBTitle: crystal structure of archaeosine trna-guanine2 transglycosylase from pyrococcus horikoshii
41d1vi0a2



not modelled 10.4 18 Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
42c3ks8D_



not modelled 9.2 40 PDB header:viral protein/rna
Chain: D: PDB Molecule:polymerase cofactor vp35;
PDBTitle: crystal structure of reston ebolavirus vp35 rna binding2 domain in complex with 18bp dsrna
43d2g7sa2



not modelled 8.4 20 Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
44c3f8mA_



not modelled 8.4 18 PDB header:transcription
Chain: A: PDB Molecule:gntr-family protein transcriptional regulator;
PDBTitle: crystal structure of phnf from mycobacterium smegmatis
45d1rh7a_



not modelled 8.3 18 Fold:Resistin
Superfamily:Resistin
Family:Resistin
46d1aj8a_



not modelled 8.0 18 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
47d1nb5i_



not modelled 7.9 40 Fold:Cystatin-like
Superfamily:Cystatin/monellin
Family:Cystatins
48d1o98a1



not modelled 7.8 40 Fold:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Superfamily:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Family:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
49c1nolA_



not modelled 7.5 18 PDB header:oxygen transport
Chain: A: PDB Molecule:hemocyanin (subunit type ii);
PDBTitle: oxygenated hemocyanin (subunit type ii)
50d1atga_



not modelled 7.4 29 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
51c3mvnA_



not modelled 7.3 19 PDB header:ligase
Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo-
PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp
52d2i10a2



not modelled 7.2 20 Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
53d1bvsa2



not modelled 7.1 21 Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
54c1hcyE_



not modelled 7.0 25 PDB header:oxygen transport
Chain: E: PDB Molecule:arthropodan hemocyanin;
PDBTitle: crystal structure of hexameric haemocyanin from panulirus interruptus2 refined at 3.2 angstroms resolution
55d1fi4a2



not modelled 6.7 10 Fold:Ferredoxin-like
Superfamily:GHMP Kinase, C-terminal domain
Family:Mevalonate 5-diphosphate decarboxylase
56c3ajvA_



not modelled 6.5 14 PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: splicing endonuclease from aeropyrum pernix
57d1z1za1



not modelled 6.5 22 Fold:Phage tail protein-like
Superfamily:Phage tail protein-like
Family:Lambda phage gpU-like
58d1dpya_



not modelled 6.4 38 Fold:Phospholipase A2, PLA2
Superfamily:Phospholipase A2, PLA2
Family:Vertebrate phospholipase A2
59d1g8fa3



not modelled 6.4 11 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ATP sulfurylase C-terminal domain
60c3gwjE_



not modelled 6.3 33 PDB header:oxygen transport
Chain: E: PDB Molecule:arylphorin;
PDBTitle: crystal structure of antheraea pernyi arylphorin
61d1yj5a2



not modelled 6.0 29 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
62d1p3da2



not modelled 5.9 26 Fold:MurD-like peptide ligases, peptide-binding domain
Superfamily:MurD-like peptide ligases, peptide-binding domain
Family:MurCDEF C-terminal domain
63c1wsuA_



not modelled 5.9 15 PDB header:translation/rna
Chain: A: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna
64d2zdra2



not modelled 5.8 21 Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:NeuB-like
65c1yrlD_



not modelled 5.7 9 PDB header:oxidoreductase
Chain: D: PDB Molecule:ketol-acid reductoisomerase;
PDBTitle: escherichia coli ketol-acid reductoisomerase
66c2xkyI_



not modelled 5.6 30 PDB header:metal transport
Chain: I: PDB Molecule:inward rectifier potassium channel 2;
PDBTitle: single particle analysis of kir2.1nc_4 in negative stain
67d1k6ma1



not modelled 5.6 22 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain
68d2o97b1



not modelled 5.5 27 Fold:IHF-like DNA-binding proteins
Superfamily:IHF-like DNA-binding proteins
Family:Prokaryotic DNA-bending protein
69c2ov2O_



not modelled 5.5 22 PDB header:protein binding/transferase
Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4;
PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4)
70d1bifa1



not modelled 5.4 22 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain
71c2odbB_



not modelled 5.3 33 PDB header:protein binding
Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6;
PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0