PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2wv0H_

Fold library id	PDB Header	Molecule	Title
c2wv0H_	PDB header: transcription	Chain: H: PDB Molecule: hth-type transcriptional repressor yvoa;	PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis

Links to external resources
Added to library: Sun Aug 29 02:11:51 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N I N K Q S P I P I Y Y Q I M E Q L K T Q I K N G E L Q P D M P L P S E R E Y A E Q R Q A L S N L V N E G L L Y R L T F V S K P K M E Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
T S S
T T
B
T T T S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L Q G L T S F T E D M K S R G M T P G S R L I D Y Q L I D S T E E L A A I L S I H K I T R V R L A N D I P M A I E S S H I P F E L A G E L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E S H F Q S S I Y D H I E R Y N S I P I S R A K Q E L E P S A A T T E E A N I L G I Q K G A P V L L I K R T T Y L Q N G T A F E H A K S V Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T S
T
T S
T T
T T S

. . . . . . . . . 220 . . . .

Sequence R G D R Y T F V H Y M D R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	I	N	K	Q	S	P	I	P	I	Y	Y	Q	I	M	E	Q	L	K	T	Q	I	K	N	G	E	L	Q	P	D	M	P	L	P	S	E	R	E	Y	A	E	Q	R	Q	A	L	S	N	L	V	N	E	G	L	L	Y	R	L	T	F	V	S	K	P	K	M	E	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S																	T	S	S		T	T		B																			T	T	T	S													S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Q	G	L	T	S	F	T	E	D	M	K	S	R	G	M	T	P	G	S	R	L	I	D	Y	Q	L	I	D	S	T	E	E	L	A	A	I	L	S	I	H	K	I	T	R	V	R	L	A	N	D	I	P	M	A	I	E	S	S	H	I	P	F	E	L	A	G	E	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S										T	T	T																																			T	T																	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	S	H	F	Q	S	S	I	Y	D	H	I	E	R	Y	N	S	I	P	I	S	R	A	K	Q	E	L	E	P	S	A	A	T	T	E	E	A	N	I	L	G	I	Q	K	G	A	P	V	L	L	I	K	R	T	T	Y	L	Q	N	G	T	A	F	E	H	A	K	S	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	S										T																									T	S		T	T													T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	R	G	D	R	Y	T	F	V	H	Y	M	D	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T