PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1e2xA_

Fold library id	PDB Header	Molecule	Title
c1e2xA_	PDB header: transcriptional regulation	Chain: A: PDB Molecule: fatty acid metabolism regulator protein;	PDBTitle: fadr, fatty acid responsive transcription factor from e.2 coli

Links to external resources
Added to library: Tue Mar 16 12:35:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q S P A G F A E E Y I I E S I W N N R F P P G T I L P A E R E L S E L I G V T R T T L R E V L Q R L A R D G W L T I Q H G K P T K V N N F W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T T S B
T
T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E T S G L N I L E T L A R L D H E S V P Q L I D N L L S V R T N I S T I F I R T A F R Q H P D K A Q E V L A T A N E V A D H A D A F A E L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T T
G G G T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y N I F R G L A F A S G N P I Y G L I L N G M K G L Y T R I G R H Y F A N P E A R S L A L G F Y H K L S A L C S E G A H D Q V Y E T V R R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S T
G G G

. . . . . . . . . 220 . .

Sequence G H E S G E I W H R M Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	S	P	A	G	F	A	E	E	Y	I	I	E	S	I	W	N	N	R	F	P	P	G	T	I	L	P	A	E	R	E	L	S	E	L	I	G	V	T	R	T	T	L	R	E	V	L	Q	R	L	A	R	D	G	W	L	T	I	Q	H	G	K	P	T	K	V	N	N	F	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S	S		T	T	S	B												T																T	T	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	T	S	G	L	N	I	L	E	T	L	A	R	L	D	H	E	S	V	P	Q	L	I	D	N	L	L	S	V	R	T	N	I	S	T	I	F	I	R	T	A	F	R	Q	H	P	D	K	A	Q	E	V	L	A	T	A	N	E	V	A	D	H	A	D	A	F	A	E	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G									T	T	T																																					G	G	G	T			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	N	I	F	R	G	L	A	F	A	S	G	N	P	I	Y	G	L	I	L	N	G	M	K	G	L	Y	T	R	I	G	R	H	Y	F	A	N	P	E	A	R	S	L	A	L	G	F	Y	H	K	L	S	A	L	C	S	E	G	A	H	D	Q	V	Y	E	T	V	R	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																							T	T	S																					T		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	G	H	E	S	G	E	I	W	H	R	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)