Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionC6Y4C9
DateSun Jul 8 11:45:10 BST 2012
Unique Job IDa2b0e6b8d53a825b

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2eqbC_
Top template information
PDB header:endocytosis/exocytosis
Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex
Confidence and coverage
Confidence: 99.8% Coverage: 51%
71 residues ( 51% of your sequence) have been modelled with 99.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MMSNSQISKLFSSISNKENSNENALKESTNKQLNNANTLAITHLKEQLSREVQRREELEG
Secondary structure 
SS confidence 
Disorder  ???????????????????????????????????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  LLEQSQKEMEDLSVSLFTEANEMVAKARQDTEVLKRELDYLRAKEKGRIGKLRSIQTAVR
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........130........
Sequence  TSIEARKLLSYSNESNYH
Secondary structure 
SS confidence 
Disorder 
????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2eqb chain C

3D model

Region: 38 - 108
Aligned: 71
Modelled: 71
Confidence: 99.8%
Identity: 31%
PDB header:endocytosis/exocytosis
Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex

Phyre2

PDB 2e7s chain M

3D model

Region: 40 - 115
Aligned: 76
Modelled: 76
Confidence: 99.2%
Identity: 29%
PDB header:endocytosis/exocytosis
Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the yeast sec2p gef domain

Phyre2

PDB 3ol1 chain A

3D model

Region: 37 - 127
Aligned: 90
Modelled: 91
Confidence: 87.8%
Identity: 11%
PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b

Phyre2

PDB 3klt chain B

3D model

Region: 52 - 116
Aligned: 65
Modelled: 65
Confidence: 82.0%
Identity: 15%
PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of a vimentin fragment

Phyre2

PDB 2fxm chain B

3D model

Region: 39 - 135
Aligned: 96
Modelled: 97
Confidence: 81.8%
Identity: 23%
PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment

Phyre2

PDB 1y4c chain A

3D model

Region: 38 - 134
Aligned: 95
Modelled: 97
Confidence: 74.9%
Identity: 12%
PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp

Phyre2

PDB 1deq chain D

3D model

Region: 39 - 129
Aligned: 91
Modelled: 91
Confidence: 74.7%
Identity: 20%
PDB header:
PDB COMPND:

Phyre2

PDB 3q8t chain B

3D model

Region: 36 - 129
Aligned: 93
Modelled: 94
Confidence: 65.8%
Identity: 16%
PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein

Phyre2

PDB 1ei3 chain C

3D model

Region: 38 - 130
Aligned: 93
Modelled: 93
Confidence: 65.4%
Identity: 12%
PDB header:
PDB COMPND:

Phyre2

PDB 1deq chain F

3D model

Region: 38 - 135
Aligned: 98
Modelled: 98
Confidence: 64.9%
Identity: 9%
PDB header:
PDB COMPND:

Phyre2

PDB 1zta chain A

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 61.3%
Identity: 15%
PDB header:dna-binding motif
Chain: A: PDB Molecule:leucine zipper monomer;
PDBTitle: the solution structure of a leucine-zipper motif peptide

Phyre2

PDB 1rb6 chain C

3D model

Region: 94 - 120
Aligned: 27
Modelled: 26
Confidence: 61.1%
Identity: 15%
PDB header:dna binding protein
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form

Phyre2

PDB 1ij2 chain C

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 59.2%
Identity: 15%
PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position

Phyre2

PDB 1ij3 chain C

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 58.4%
Identity: 15%
PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position

Phyre2

PDB 1ij3 chain B

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 58.4%
Identity: 15%
PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position

Phyre2

PDB 3k7z chain A

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 58.4%
Identity: 15%
PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution

Phyre2

PDB 3k7z chain B

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 58.4%
Identity: 15%
PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution

Phyre2

PDB 1rb1 chain B

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 58.4%
Identity: 15%
PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution

Phyre2

PDB 1rb1 chain A

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 58.4%
Identity: 15%
PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution

Phyre2

PDB 1swi chain A

3D model

Region: 94 - 119
Aligned: 26
Modelled: 26
Confidence: 58.3%
Identity: 15%
PDB header:leucine zipper
Chain: A: PDB Molecule:gcn4p1;
PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene

Phyre2
1
c2eqbC_
2
c2e7sM_
3
c3ol1A_
4
c3kltB_
5
c2fxmB_
6
c1y4cA_
7
c1deqD_
8
c3q8tB_
9
c1ei3C_
10
c1deqF_
11
c1ztaA_
12
c1rb6C_
13
c1ij2C_
14
c1ij3C_
15
c1ij3B_
16
c3k7zA_
17
c3k7zB_
18
c1rb1B_
19
c1rb1A_
20
c1swiA_
21
22
23
24
25
26
27
28
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2eqbC_
99.8 31 PDB header:endocytosis/exocytosis
Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex
2c2e7sM_
99.2 29 PDB header:endocytosis/exocytosis
Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the yeast sec2p gef domain
3c3ol1A_
87.8 11 PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b
4c3kltB_
82.0 15 PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of a vimentin fragment
5c2fxmB_
81.8 23 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
6c1y4cA_
74.9 12 PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
7c1deqD_
74.7 20 PDB header:
PDB COMPND:
8c3q8tB_
65.8 16 PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein
9c1ei3C_
65.4 12 PDB header:
PDB COMPND:
10c1deqF_
64.9 9 PDB header:
PDB COMPND:
11c1ztaA_
61.3 15 PDB header:dna-binding motif
Chain: A: PDB Molecule:leucine zipper monomer;
PDBTitle: the solution structure of a leucine-zipper motif peptide
12c1rb6C_
61.1 15 PDB header:dna binding protein
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form
13c1ij2C_
59.2 15 PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
14c1ij3C_
58.4 15 PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
15c1ij3B_
58.4 15 PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
16c3k7zA_
58.4 15 PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
17c3k7zB_
58.4 15 PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
18c1rb1B_
58.4 15 PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
19c1rb1A_
58.4 15 PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
20c1swiA_
58.3 15 PDB header:leucine zipper
Chain: A: PDB Molecule:gcn4p1;
PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene
21c3ojaB_
not modelled 57.4 9 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
22c3dtpA_
not modelled 57.3 23 PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
23c1ij2B_
not modelled 56.7 15 PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
24c2o7hF_
not modelled 56.1 15 PDB header:transcription
Chain: F: PDB Molecule:general control protein gcn4;
PDBTitle: crystal structure of trimeric coiled coil gcn4 leucine zipper
25c3u59C_
not modelled 53.8 11 PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta
26c1ce0B_
not modelled 49.8 8 PDB header:hiv-1 envelope protein
Chain: B: PDB Molecule:protein (leucine zipper model h38-p1);
PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model
27c1wt6B_
not modelled 48.1 22 PDB header:transferase
Chain: B: PDB Molecule:myotonin-protein kinase;
PDBTitle: coiled-coil domain of dmpk
28c1bf5A_
not modelled 43.8 8 PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex
29c3t97A_
not modelled 42.8 26 PDB header:protein transport
Chain: A: PDB Molecule:nuclear pore glycoprotein p62;
PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup62/nup54
30c1cosB_
not modelled 42.8 27 PDB header:alpha-helical bundle
Chain: B: PDB Molecule:coiled serine;
PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle
31c1cosC_
not modelled 42.8 27 PDB header:alpha-helical bundle
Chain: C: PDB Molecule:coiled serine;
PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle
32c1cosA_
not modelled 42.8 27 PDB header:alpha-helical bundle
Chain: A: PDB Molecule:coiled serine;
PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle
33c2o98P_
not modelled 42.3 23 PDB header:protein binding
Chain: P: PDB Molecule:plasma membrane h+ atpase;
PDBTitle: structure of the 14-3-3 / h+-atpase plant complex
34c2pnvA_
not modelled 40.3 17 PDB header:membrane protein
Chain: A: PDB Molecule:small conductance calcium-activated potassium
PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus
35c2xzrA_
not modelled 37.9 13 PDB header:cell adhesion
Chain: A: PDB Molecule:immunoglobulin-binding protein eibd;
PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors
36c1coiA_
not modelled 37.6 19 PDB header:alpha-helical bundle
Chain: A: PDB Molecule:coil-vald;
PDBTitle: designed trimeric coiled coil-vald
37c1bg1A_
not modelled 36.3 9 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex
38c2d3eD_
not modelled 34.0 19 PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
39d1cxzb_
not modelled 33.8 14 Fold:Long alpha-hairpin
Superfamily:HR1 repeat
Family:HR1 repeat
40c3ipkA_
not modelled 29.3 9 PDB header:cell adhesion
Chain: A: PDB Molecule:agi/ii;
PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
41c3vkhD_
not modelled 29.1 6 PDB header:motor protein
Chain: D: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein
42c3m48A_
not modelled 28.1 14 PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4 leucine zipper peptide mutant
43c3batB_
not modelled 27.8 20 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, striated muscle/general
PDBTitle: crystal structure of the n-terminal region of the scallop2 myosin rod, monoclinic (p21) form
44c1zilB_
not modelled 27.3 15 PDB header:leucine zipper
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant asn16gln in the dimeric2 state
45c1zilA_
not modelled 27.3 15 PDB header:leucine zipper
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant asn16gln in the dimeric2 state
46c1zimC_
not modelled 25.8 15 PDB header:leucine zipper
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant asn16gln in the trimeric2 state
47c1zimA_
not modelled 25.8 15 PDB header:leucine zipper
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant asn16gln in the trimeric2 state
48c1zimB_
not modelled 25.8 15 PDB header:leucine zipper
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant asn16gln in the trimeric2 state
49c3ghgK_
not modelled 25.3 15 PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
50c3ghgD_
not modelled 24.1 15 PDB header:blood clotting
Chain: D: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of human fibrinogen
51c3hnwB_
not modelled 22.9 17 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
52c2ztaB_
not modelled 22.9 15 PDB header:leucine zipper
Chain: B: PDB Molecule:gcn4 leucine zipper;
PDBTitle: x-ray structure of the gcn4 leucine zipper, a two-stranded,2 parallel coiled coil
53c2ztaA_
not modelled 22.9 15 PDB header:leucine zipper
Chain: A: PDB Molecule:gcn4 leucine zipper;
PDBTitle: x-ray structure of the gcn4 leucine zipper, a two-stranded,2 parallel coiled coil
54c3i1gA_
not modelled 22.1 15 PDB header:metal binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: crystal structure of a gcn4 leucine zipper mutant at 1.6 a2 resolution
55c1ce9C_
not modelled 21.0 15 PDB header:helix capping
Chain: C: PDB Molecule:protein (gcn4-pmse);
PDBTitle: helix capping in the gcn4 leucine zipper
56c1ce9A_
not modelled 21.0 15 PDB header:helix capping
Chain: A: PDB Molecule:protein (gcn4-pmse);
PDBTitle: helix capping in the gcn4 leucine zipper
57c1ce9D_
not modelled 21.0 15 PDB header:helix capping
Chain: D: PDB Molecule:protein (gcn4-pmse);
PDBTitle: helix capping in the gcn4 leucine zipper
58c1ce9B_
not modelled 21.0 15 PDB header:helix capping
Chain: B: PDB Molecule:protein (gcn4-pmse);
PDBTitle: helix capping in the gcn4 leucine zipper
59c1yv0I_
not modelled 20.9 30 PDB header:contractile protein
Chain: I: PDB Molecule:troponin i, fast skeletal muscle;
PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 free state
60c2b9cA_
not modelled 20.6 13 PDB header:contractile protein
Chain: A: PDB Molecule:striated-muscle alpha tropomyosin;
PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin
61c3p8mD_
not modelled 20.4 15 PDB header:protein binding
Chain: D: PDB Molecule:general control protein gcn4;
PDBTitle: human dynein light chain (dynll2) in complex with an in vitro evolved2 peptide dimerized by leucine zipper
62c1ij2A_
not modelled 19.6 15 PDB header:transcription
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
63c1zikB_
not modelled 19.2 15 PDB header:leucine zipper
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant asn16lys in the dimeric2 state
64c1zikA_
not modelled 19.2 15 PDB header:leucine zipper
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant asn16lys in the dimeric2 state
65c2x6pA_
not modelled 18.8 27 PDB header:de novo protein
Chain: A: PDB Molecule:coil ser l19c;
PDBTitle: crystal structure of coil ser l19c
66c2x6pC_
not modelled 18.8 27 PDB header:de novo protein
Chain: C: PDB Molecule:coil ser l19c;
PDBTitle: crystal structure of coil ser l19c
67c2x6pB_
not modelled 18.8 27 PDB header:de novo protein
Chain: B: PDB Molecule:coil ser l19c;
PDBTitle: crystal structure of coil ser l19c
68c3qsvD_
not modelled 18.6 31 PDB header:transcription/dna
Chain: D: PDB Molecule:mothers against decapentaplegic homolog 4;
PDBTitle: structural basis for dna recognition by constitutive smad4 mh1 dimers
69c1grjA_
not modelled 18.6 19 PDB header:transcription regulation
Chain: A: PDB Molecule:grea protein;
PDBTitle: grea transcript cleavage factor from escherichia coli
70c3kmpA_
not modelled 18.5 18 PDB header:transcription regulator/dna
Chain: A: PDB Molecule:smad1-mh1;
PDBTitle: crystal structure of smad1-mh1/dna complex
71c3k7zC_
not modelled 18.2 15 PDB header:dna binding protein
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
72c1rb1C_
not modelled 18.2 15 PDB header:dna binding protein
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
73c1rb6B_
not modelled 17.8 15 PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form
74c1rb4B_
not modelled 17.8 15 PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal automatic solution
75c1rb4A_
not modelled 17.2 15 PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal automatic solution
76c1swiB_
not modelled 17.2 15 PDB header:leucine zipper
Chain: B: PDB Molecule:gcn4p1;
PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene
77c2no2A_
not modelled 16.9 16 PDB header:cell adhesion
Chain: A: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1
78c1i84V_
not modelled 16.1 19 PDB header:contractile protein
Chain: V: PDB Molecule:smooth muscle myosin heavy chain;
PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.
79c1rb5C_
not modelled 16.1 15 PDB header:dna binding protein
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a trigonal form
80c1ij3A_
not modelled 15.8 15 PDB header:transcription
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
81c1deqO_
not modelled 15.7 12 PDB header:
PDB COMPND:
82c1rb5B_
not modelled 15.4 15 PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a trigonal form
83c1rb6A_
not modelled 15.4 15 PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form
84c1rb5A_
not modelled 15.4 15 PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a trigonal form
85c2p4vA_
not modelled 15.3 19 PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor greb;
PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution
86c3m9bK_
not modelled 15.0 8 PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
87c2efrB_
not modelled 15.0 19 PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
88c2wpzA_
not modelled 14.6 12 PDB header:transcription
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4 leucine zipper mutant with two vxxnxxx motifs2 coordinating chloride
89c2v66C_
not modelled 14.2 23 PDB header:structural protein
Chain: C: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c
90c2jgoA_
not modelled 13.7 23 PDB header:de novo protein
Chain: A: PDB Molecule:coil ser l9c;
PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c
91c2jgoB_
not modelled 13.7 23 PDB header:de novo protein
Chain: B: PDB Molecule:coil ser l9c;
PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c
92c3ljmC_
not modelled 13.7 23 PDB header:de novo protein
Chain: C: PDB Molecule:coil ser l9c;
PDBTitle: structure of de novo designed apo peptide coil ser l9c
93c3ljmB_
not modelled 13.7 23 PDB header:de novo protein
Chain: B: PDB Molecule:coil ser l9c;
PDBTitle: structure of de novo designed apo peptide coil ser l9c
94c2jgoC_
not modelled 13.7 23 PDB header:de novo protein
Chain: C: PDB Molecule:coil ser l9c;
PDBTitle: stucture of the arsenated de novo designed peptide coil ser2 l9c
95c3ljmA_
not modelled 13.7 23 PDB header:de novo protein
Chain: A: PDB Molecule:coil ser l9c;
PDBTitle: structure of de novo designed apo peptide coil ser l9c
96c2wpzB_
not modelled 13.5 12 PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4 leucine zipper mutant with two vxxnxxx motifs2 coordinating chloride
97c1aq5C_
not modelled 13.4 7 PDB header:coiled-coil
Chain: C: PDB Molecule:cartilage matrix protein;
PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures
98c2cceB_
not modelled 13.2 15 PDB header:four helix bundle
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: parallel configuration of pli e20s
99c2wpzC_
not modelled 12.9 12 PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4 leucine zipper mutant with two vxxnxxx motifs2 coordinating chloride

Binding site prediction 

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