Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA1A547
DateWed Jul 10 14:22:40 BST 2013
Unique Job IDfa9be7a2981c470f
SequenceMLVSWDHPKM ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.739 Y:39.288 Z:40.837
Model (left) based on template c1s2jA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan recognition protein sa cg11709-pa;
PDBTitle: crystal structure of the drosophila pattern-recognition2 receptor pgrp-sa
Confidence and coverage
Confidence:100.0% Coverage: 47%
163 residues ( 47% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
297 residues ( 86%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MLVSWDHPKMLPRLLGFLALSLLACGNPTIVSRKEWGASSLTCRVPLSLPVPYLIIEQVT
Secondary structure 
SS confidence 
Disorder  ???????
?????????????
?
??????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  RMQCQDQITCSQVVRVLQSQYVHNKGWCDIAFNFLVGDDGKVYEGVGWYVQGLHTQGYNN
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  VSLGIAFFGSKIGSPSPAALSATEDLIFFAIQNGYLSPKYIQPFLLKEETCLVPQHSEIP
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  KKACPNITPRSAWEARETHCPQMNLPAKFVIIIHTAGKSCNESADCLVRVRDTQSFHIDN
Secondary structure 
SS confidence 
Disorder 
????????????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  QDFCDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAA
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........310.........320.........330.........340.......
Sequence  QSLIQCAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHFKH
Secondary structure 
SS confidence 
Disorder 
???????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 15%)
Alpha helix ( 27%)
Beta strand ( 18%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1s2j chain A

3D model

Region: 184 - 346
Aligned: 163
Modelled: 163
Confidence: 100.0%
Identity: 43%
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan recognition protein sa cg11709-pa;
PDBTitle: crystal structure of the drosophila pattern-recognition2 receptor pgrp-sa

Phyre2

PDB 1sxr chain A

3D model

Region: 184 - 346
Aligned: 163
Modelled: 163
Confidence: 100.0%
Identity: 43%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 2f2l chain A domain 1

3D model

Region: 187 - 345
Aligned: 158
Modelled: 159
Confidence: 100.0%
Identity: 32%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 2cb3 chain A domain 1

3D model

Region: 185 - 347
Aligned: 163
Modelled: 163
Confidence: 100.0%
Identity: 44%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 1yck chain A domain 1

3D model

Region: 184 - 346
Aligned: 163
Modelled: 163
Confidence: 100.0%
Identity: 45%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 2rkq chain A

3D model

Region: 186 - 346
Aligned: 161
Modelled: 161
Confidence: 100.0%
Identity: 40%
PDB header:immune system
Chain: A: PDB Molecule:peptidoglycan-recognition protein-sd;
PDBTitle: crystal structure of drosophila peptidoglycan recognition2 protein sd (pgrp-sd)

Phyre2

PDB 2f2l chain X domain 1

3D model

Region: 187 - 347
Aligned: 161
Modelled: 161
Confidence: 100.0%
Identity: 45%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 2xz4 chain A

3D model

Region: 186 - 347
Aligned: 162
Modelled: 162
Confidence: 100.0%
Identity: 37%
PDB header:immune system
Chain: A: PDB Molecule:peptidoglycan-recognition protein lf;
PDBTitle: crystal structure of the lfz ectodomain of the2 peptidoglycan recognition protein lf

Phyre2

PDB 1oht chain A

3D model

Region: 186 - 347
Aligned: 162
Modelled: 162
Confidence: 100.0%
Identity: 38%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 1oht chain A

3D model

Region: 186 - 347
Aligned: 162
Modelled: 162
Confidence: 100.0%
Identity: 38%
PDB header:hydrolase
Chain: A: PDB Molecule:cg14704 protein;
PDBTitle: peptidoglycan recognition protein-lb

Phyre2

PDB 1sk4 chain A

3D model

Region: 185 - 347
Aligned: 162
Modelled: 163
Confidence: 100.0%
Identity: 77%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 3ep1 chain B

3D model

Region: 184 - 345
Aligned: 157
Modelled: 162
Confidence: 100.0%
Identity: 31%
PDB header:immune system
Chain: B: PDB Molecule:pgrp-hd - peptidoglycan recognition protein
PDBTitle: structure of the pgrp-hd from alvinella pompejana

Phyre2

PDB 2xz8 chain A

3D model

Region: 29 - 168
Aligned: 133
Modelled: 140
Confidence: 100.0%
Identity: 30%
PDB header:immune system
Chain: A: PDB Molecule:peptidoglycan-recognition protein lf;
PDBTitle: crystal structure of the lfw ectodomain of the2 peptidoglycan recognition protein lf

Phyre2

PDB 1lba chain A

3D model

Region: 206 - 341
Aligned: 127
Modelled: 131
Confidence: 100.0%
Identity: 27%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 2bgx chain A domain 2

3D model

Region: 186 - 341
Aligned: 147
Modelled: 156
Confidence: 99.9%
Identity: 15%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 1yb0 chain A domain 1

3D model

Region: 185 - 346
Aligned: 143
Modelled: 162
Confidence: 99.9%
Identity: 11%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 3hma chain A

3D model

Region: 197 - 346
Aligned: 134
Modelled: 150
Confidence: 99.9%
Identity: 22%
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase xlya;
PDBTitle: amidase from bacillus subtilis

Phyre2

PDB 1j3g chain A

3D model

Region: 186 - 344
Aligned: 157
Modelled: 159
Confidence: 99.8%
Identity: 13%
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like

Phyre2

PDB 4bol chain A

3D model

Region: 199 - 341
Aligned: 127
Modelled: 143
Confidence: 99.8%
Identity: 21%
PDB header:hydrolase
Chain: A: PDB Molecule:ampdh2;
PDBTitle: crystal structure of ampdh2 from pseudomonas aeruginosa in2 complex with pentapeptide

Phyre2

PDB 2bh7 chain A

3D model

Region: 186 - 338
Aligned: 137
Modelled: 153
Confidence: 99.7%
Identity: 21%
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase;
PDBTitle: crystal structure of a semet derivative of amid at 2.22 angstroms

Phyre2

PDB 2b3y chain A domain 2

3D model

Region: 120 - 182
Aligned: 56
Modelled: 56
Confidence: 52.4%
Identity: 21%
Fold: Aconitase iron-sulfur domain
Superfamily: Aconitase iron-sulfur domain
Family: Aconitase iron-sulfur domain

Phyre2
1
c1s2jA_
2
d1sxra_
3
d2f2la1
4
d2cb3a1
5
d1ycka1
6
c2rkqA_
7
d2f2lx1
8
c2xz4A_
9
d1ohta_
10
c1ohtA_
11
d1sk4a_
12
c3ep1B_
13
c2xz8A_
14
d1lbaa_
15
d2bgxa2
16
d1yb0a1
17
c3hmaA_
18
d1j3ga_
19
c4bolA_
20
c2bh7A_
21
22
d2b3ya2
23
24
25
26
27
28
29
30
31
32
33
34
35
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37
38
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1s2jA_
100.0 43 PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan recognition protein sa cg11709-pa;
PDBTitle: crystal structure of the drosophila pattern-recognition2 receptor pgrp-sa
2d1sxra_
100.0 43 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
3d2f2la1
100.0 32 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
4d2cb3a1
100.0 44 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
5d1ycka1
100.0 45 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
6c2rkqA_
100.0 40 PDB header:immune system
Chain: A: PDB Molecule:peptidoglycan-recognition protein-sd;
PDBTitle: crystal structure of drosophila peptidoglycan recognition2 protein sd (pgrp-sd)
7d2f2lx1
100.0 45 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
8c2xz4A_
100.0 37 PDB header:immune system
Chain: A: PDB Molecule:peptidoglycan-recognition protein lf;
PDBTitle: crystal structure of the lfz ectodomain of the2 peptidoglycan recognition protein lf
9d1ohta_
100.0 38 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
10c1ohtA_
100.0 38 PDB header:hydrolase
Chain: A: PDB Molecule:cg14704 protein;
PDBTitle: peptidoglycan recognition protein-lb
11d1sk4a_
100.0 77 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
12c3ep1B_
100.0 31 PDB header:immune system
Chain: B: PDB Molecule:pgrp-hd - peptidoglycan recognition protein
PDBTitle: structure of the pgrp-hd from alvinella pompejana
13c2xz8A_
100.0 30 PDB header:immune system
Chain: A: PDB Molecule:peptidoglycan-recognition protein lf;
PDBTitle: crystal structure of the lfw ectodomain of the2 peptidoglycan recognition protein lf
14d1lbaa_
100.0 27 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
15d2bgxa2
99.9 15 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
16d1yb0a1
99.9 11 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
17c3hmaA_
99.9 22 PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase xlya;
PDBTitle: amidase from bacillus subtilis
18d1j3ga_
99.8 13 Fold:N-acetylmuramoyl-L-alanine amidase-like
Superfamily:N-acetylmuramoyl-L-alanine amidase-like
Family:N-acetylmuramoyl-L-alanine amidase-like
19c4bolA_
99.8 21 PDB header:hydrolase
Chain: A: PDB Molecule:ampdh2;
PDBTitle: crystal structure of ampdh2 from pseudomonas aeruginosa in2 complex with pentapeptide
20c2bh7A_
99.7 21 PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase;
PDBTitle: crystal structure of a semet derivative of amid at 2.22 angstroms
21c3latB_
not modelled 98.9 14 PDB header:hydrolase
Chain: B: PDB Molecule:bifunctional autolysin;
PDBTitle: crystal structure of staphylococcus peptidoglycan hydrolase2 amie
22d2b3ya2
52.4 21 Fold:Aconitase iron-sulfur domain
Superfamily:Aconitase iron-sulfur domain
Family:Aconitase iron-sulfur domain
23d1whqa_
not modelled 51.4 17 Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD)
24d2etla1
not modelled 48.3 24 Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Ubiquitin carboxyl-terminal hydrolase UCH-L
25c2b3yB_
not modelled 45.6 21 PDB header:lyase
Chain: B: PDB Molecule:iron-responsive element binding protein 1;
PDBTitle: structure of a monoclinic crystal form of human cytosolic aconitase2 (irp1)
26c4ig7A_
not modelled 33.0 19 PDB header:hydrolase/signaling protein
Chain: A: PDB Molecule:ubiquitin c-terminal hydrolase 37;
PDBTitle: crystal structure of trichinella spiralis uch37 bound to ubiquitin2 vinyl methyl ester
27c2yzhD_
not modelled 25.6 24 PDB header:oxidoreductase
Chain: D: PDB Molecule:probable thiol peroxidase;
PDBTitle: crystal structure of peroxiredoxin-like protein from aquifex aeolicus
28c2lrtA_
not modelled 25.6 24 PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of the uncharacterized thioredoxin-like protein2 bvu_1432 from bacteroides vulgatus
29d1xd3a_
not modelled 24.7 47 Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Ubiquitin carboxyl-terminal hydrolase UCH-L
30d1a9xb1
not modelled 24.2 32 Fold:The "swivelling" beta/beta/alpha domain
Superfamily:Carbamoyl phosphate synthetase, small subunit N-terminal domain
Family:Carbamoyl phosphate synthetase, small subunit N-terminal domain
31c2ywiA_
not modelled 24.0 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical conserved protein;
PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus
32d1cmxa_
not modelled 18.0 32 Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Ubiquitin carboxyl-terminal hydrolase UCH-L
33d1zzoa1
not modelled 17.5 19 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
34d1zj8a1
not modelled 17.1 22 Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
35c2k6xA_
not modelled 16.6 24 PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
36c3lorB_
not modelled 14.3 16 PDB header:isomerase
Chain: B: PDB Molecule:thiol-disulfide isomerase and thioredoxins;
PDBTitle: the crystal structure of a thiol-disulfide isomerase from2 corynebacterium glutamicum to 2.2a
37c1keeH_
not modelled 13.5 32 PDB header:ligase
Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain;
PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
38d1knga_
not modelled 13.1 19 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
39d1t23a_
not modelled 13.1 43 Fold:Chromosomal protein MC1
Superfamily:Chromosomal protein MC1
Family:Chromosomal protein MC1
40d1xm8a_
not modelled 12.9 13 Fold:Metallo-hydrolase/oxidoreductase
Superfamily:Metallo-hydrolase/oxidoreductase
Family:Glyoxalase II (hydroxyacylglutathione hydrolase)
41c3kebB_
not modelled 12.9 21 PDB header:oxidoreductase
Chain: B: PDB Molecule:probable thiol peroxidase;
PDBTitle: thiol peroxidase from chromobacterium violaceum
42c1y88A_
not modelled 12.2 30 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein af1548;
PDBTitle: crystal structure of protein of unknown function af1548
43c3uinD_
not modelled 11.9 13 PDB header:ligase/isomerase/protein binding
Chain: D: PDB Molecule:e3 sumo-protein ligase ranbp2;
PDBTitle: complex between human rangap1-sumo2, ubc9 and the ir1 domain from2 ranbp2
44c1u3eM_
not modelled 11.3 53 PDB header:dna binding protein/dna
Chain: M: PDB Molecule:hnh homing endonuclease;
PDBTitle: dna binding and cleavage by the hnh homing endonuclease i-hmui
45c1r6tA_
not modelled 11.1 15 PDB header:ligase
Chain: A: PDB Molecule:tryptophanyl-trna synthetase;
PDBTitle: crystal structure of human tryptophanyl-trna synthetase
46d1zofa1
not modelled 10.8 20 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
47c2lvlA_
not modelled 10.5 36 PDB header:lantibiotic-binding-protein
Chain: A: PDB Molecule:spai;
PDBTitle: nmr structure the lantibiotic immunity protein spai
48c3gknA_
not modelled 10.2 31 PDB header:oxidoreductase
Chain: A: PDB Molecule:bacterioferritin comigratory protein;
PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures
49c3t2dA_
not modelled 9.9 19 PDB header:lyase, hydrolase
Chain: A: PDB Molecule:fructose-1,6-bisphosphate aldolase/phosphatase;
PDBTitle: fructose-1,6-bisphosphate aldolase/phosphatase from thermoproteus2 neutrophilus, fbp-bound form
50c2ywnA_
not modelled 9.9 23 PDB header:oxidoreductase
Chain: A: PDB Molecule:peroxiredoxin-like protein;
PDBTitle: crystal structure of peroxiredoxin-like protein from2 sulfolobus tokodaii
51c2p5qA_
not modelled 9.6 47 PDB header:oxidoreductase
Chain: A: PDB Molecule:glutathione peroxidase 5;
PDBTitle: crystal structure of the poplar glutathione peroxidase 5 in2 the reduced form
52c4fo5A_
not modelled 9.5 23 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin-like protein;
PDBTitle: crystal structure of a thioredoxin-like protein (bdi_1100) from2 parabacteroides distasonis atcc 8503 at 2.02 a resolution
53c4evmA_
not modelled 9.4 5 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin family protein;
PDBTitle: 1.5 angstrom crystal structure of soluble domain of membrane-anchored2 thioredoxin family protein from streptococcus pneumoniae strain3 canada mdr_19a
54c3cynC_
not modelled 9.2 25 PDB header:oxidoreductase
Chain: C: PDB Molecule:probable glutathione peroxidase 8;
PDBTitle: the structure of human gpx8
55c3dwvB_
not modelled 9.2 25 PDB header:oxidoreductase
Chain: B: PDB Molecule:glutathione peroxidase-like protein;
PDBTitle: glutathione peroxidase-type tryparedoxin peroxidase, oxidized form
56c2obiA_
not modelled 8.4 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:phospholipid hydroperoxide glutathione
PDBTitle: crystal structure of the selenocysteine to cysteine mutant2 of human phospholipid hydroperoxide glutathione peroxidase3 (gpx4)
57c3u5rG_
not modelled 8.4 21 PDB header:structural genomics, unknown function
Chain: G: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a hypothetical protein smc02350 from2 sinorhizobium meliloti 1021
58d1jfua_
not modelled 8.2 18 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
59d2hq4a1
not modelled 8.1 14 Fold:PH1570-like
Superfamily:PH1570-like
Family:PH1570-like
60d1r6ta2
not modelled 8.1 15 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain
61c1jrjA_
not modelled 8.0 16 PDB header:hormone/growth factor
Chain: A: PDB Molecule:exendin-4;
PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol
62c1d0rA_
not modelled 8.0 24 PDB header:hormone/growth factor
Chain: A: PDB Molecule:glucagon-like peptide-1-(7-36)-amide;
PDBTitle: solution structure of glucagon-like peptide-1-(7-36)-amide2 in trifluoroethanol/water
63d1gp1a_
not modelled 7.8 67 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
64c3a7sA_
not modelled 7.7 24 PDB header:hydrolase
Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase isozyme l5;
PDBTitle: catalytic domain of uch37
65c2ls5A_
not modelled 7.5 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of a putative protein disulfide isomerase from2 bacteroides thetaiotaomicron
66c2wdtA_
not modelled 7.4 21 PDB header:hydrolase/protein binding
Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase l3;
PDBTitle: crystal structure of plasmodium falciparum uchl3 in complex2 with the suicide inhibitor ubvme
67c1z5sD_
not modelled 7.2 13 PDB header:ligase
Chain: D: PDB Molecule:ran-binding protein 2;
PDBTitle: crystal structure of a complex between ubc9, sumo-1,2 rangap1 and nup358/ranbp2
68d1xhoa_
not modelled 7.2 20 Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:Chorismate mutase
69c1xhoB_
not modelled 7.2 20 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:chorismate mutase;
PDBTitle: chorismate mutase from clostridium thermocellum cth-682
70c2r37A_
not modelled 7.1 24 PDB header:oxidoreductase
Chain: A: PDB Molecule:glutathione peroxidase 3;
PDBTitle: crystal structure of human glutathione peroxidase 3 (selenocysteine to2 glycine mutant)
71d2f8aa1
not modelled 6.8 67 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
72c2l5oA_
not modelled 6.8 31 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative thioredoxin;
PDBTitle: solution structure of a putative thioredoxin from neisseria2 meningitidis
73c2kgsA_
not modelled 6.6 21 PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922;
PDBTitle: solution structure of the amino-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis
74d1zyea1
not modelled 6.5 15 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
75c4hdeA_
not modelled 6.5 38 PDB header:lipid binding protein
Chain: A: PDB Molecule:sco1/senc family lipoprotein;
PDBTitle: the crystal structure of a sco1/senc family lipoprotein from bacillus2 anthracis str. ames
76c3tueB_
not modelled 6.5 20 PDB header:oxidoreductase
Chain: B: PDB Molecule:tryparedoxin peroxidase;
PDBTitle: the structure of tryparedoxin peroxidase i from leishmania major
77c3ewlA_
not modelled 6.3 10 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized conserved protein bf1870;
PDBTitle: crystal structure of conserved protein bf1870 of unknown function from2 bacteroides fragilis
78d1vl6a1
not modelled 6.3 23 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
79c2fyoA_
not modelled 6.3 21 PDB header:transferase
Chain: A: PDB Molecule:carnitine o-palmitoyltransferase ii,
PDBTitle: crystal structure of rat carnitine palmitoyltransferase 22 in space group p43212
80c2ke4A_
not modelled 6.0 5 PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
81d1pj3a1
not modelled 6.0 14 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
82c2b1kA_
not modelled 6.0 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe;
PDBTitle: crystal structure of e. coli ccmg protein
83c4eo3A_
not modelled 5.9 31 PDB header:oxidoreductase
Chain: A: PDB Molecule:bacterioferritin comigratory protein/nadh dehydrogenase;
PDBTitle: peroxiredoxin nitroreductase fusion enzyme
84c2h66G_
not modelled 5.9 30 PDB header:structural genomics/oxidoreductase
Chain: G: PDB Molecule:pv-pf14_0368;
PDBTitle: the crystal structure of plasmodium vivax 2-cys2 peroxiredoxin
85c2he3A_
not modelled 5.8 26 PDB header:oxidoreductase
Chain: A: PDB Molecule:glutathione peroxidase 2;
PDBTitle: crystal structure of the selenocysteine to cysteine mutant of human2 glutathionine peroxidase 2 (gpx2)
86c3eurA_
not modelled 5.8 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the c-terminal domain of uncharacterized protein2 from bacteroides fragilis nctc 9343
87c4ka0C_
not modelled 5.7 12 PDB header:oxidoreductase
Chain: C: PDB Molecule:putative thiol-disulfide oxidoreductase;
PDBTitle: crystal structure of a putative thiol-disulfide oxidoreductase from2 bacteroides vulgatus (target nysgrc-011676), space group p21221
88d1m98a1
not modelled 5.6 14 Fold:Orange carotenoid protein, N-terminal domain
Superfamily:Orange carotenoid protein, N-terminal domain
Family:Orange carotenoid protein, N-terminal domain
89c4htyA_
not modelled 5.5 13 PDB header:hydrolase
Chain: A: PDB Molecule:cellulase;
PDBTitle: crystal structure of a metagenome-derived cellulase cel5a
90d1o0sa1
not modelled 5.5 29 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
91d1lu4a_
not modelled 5.5 10 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
92c2p18A_
not modelled 5.5 11 PDB header:hydrolase
Chain: A: PDB Molecule:glyoxalase ii;
PDBTitle: crystal structure of the leishmania infantum glyoxalase ii
93c2lrnA_
not modelled 5.4 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:thiol:disulfide interchange protein;
PDBTitle: solution structure of a thiol:disulfide interchange protein from2 bacteroides sp.
94c2bmxB_
not modelled 5.3 14 PDB header:oxidoreductase
Chain: B: PDB Molecule:alkyl hydroperoxidase c;
PDBTitle: mycobacterium tuberculosis ahpc
95c2p7jA_
not modelled 5.3 25 PDB header:transcription
Chain: A: PDB Molecule:putative sensory box/ggdef family protein;
PDBTitle: crystal structure of the domain of putative sensory box/ggdef family2 protein from vibrio parahaemolyticus
96c2m72A_
not modelled 5.3 31 PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized thioredoxin-like protein;
PDBTitle: solution structure of uncharacterized thioredoxin-like protein pg_21752 from porphyromonas gingivalis
97c4je1A_
not modelled 5.3 11 PDB header:oxidoreductase
Chain: A: PDB Molecule:probable thiol peroxidase;
PDBTitle: crystal structure of thiol peroxidase from burkholderia cenocepacia2 j2315
98d1gq2a1
not modelled 5.2 21 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
99c2j8aA_
not modelled 5.2 18 PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-4
PDBTitle: x-ray structure of the n-terminus rrm domain of set1

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