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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2p7jA_

Fold library idPDB HeaderMoleculeTitle
c2p7jA_PDB header: transcriptionChain: A: PDB Molecule: putative sensory box/ggdef family protein;PDBTitle: crystal structure of the domain of putative sensory2 box/ggdef family protein from vibrio parahaemolyticus


Added to library: Tue Mar 16 14:12:53 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NNVENTAKEALHQLAYTGREYNNIQDQIETISDLLGHSQSLYDYLREPSKANLTILENXWSSVARNQKLY
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Known secondary structure (DSSP)
T
S



 .........80.........90.........100.........110.........120.........130.........140
Sequence KQIRFLDTSGTEKVRIKYDFKTSIAGPSLILRDKSAREYFKYAQSLDNEQISAWGIELERDKGELVYPLS
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Known secondary structure (DSSP)
TTSBTTTT




B
TTSTS
TT


TT
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence PSLRILXPISVNDVRQGYLVLNVDIEYLSSLLNYSPVRDFHIELVKHKGFYIASPDESRLYGDIIPERSQ
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Known secondary structure (DSSP) TTSTTTT
TTSB
S
GGGBTTTTSTT
TT
 .........220.........230.........240.........250.........260.....
Sequence FNFSNXYPDIWPRVVSEQAGYSYSGEHLIAFSSIKFVSNEPLHLIIDLSNEQLSK
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Known secondary structure (DSSP)
B
TTTTT


SS
SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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