PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4ig7A_

Fold library id	PDB Header	Molecule	Title
c4ig7A_	PDB header: hydrolase/signaling protein	Chain: A: PDB Molecule: ubiquitin c-terminal hydrolase 37;	PDBTitle: crystal structure of trichinella spiralis uch37 bound to ubiquitin2 vinyl methyl ester

Links to external resources
Added to library: Sat Jun 8 09:09:20 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G N W C L I E S D P G I F T E M I H G F G C T G L Q V E E L V V L D E S I E H L K P I H G F I F L F R W L K T D V Y F S Q Q V I Q N A C A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
B S S
T T
G G G
S
S
S S G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q A L I N L L L N C D H P D V D L G P T L K E F K D F T Y D L D S A S R G L C L T N S E K I R A V H N S F G E D V F H F V T Y V P V N D G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
B
T T T S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y E L D G L R A A P L R L G T V A S D G D W T E V A I K A I K E K I K N Y G E S E V R F N L M A V I S D Q K L K Y E R E M E K F A Q A G D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
S S
T T S
T T
T

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence A E V D R L V A L I A A E D A K R E R Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	N	W	C	L	I	E	S	D	P	G	I	F	T	E	M	I	H	G	F	G	C	T	G	L	Q	V	E	E	L	V	V	L	D	E	S	I	E	H	L	K	P	I	H	G	F	I	F	L	F	R	W	L	K	T	D	V	Y	F	S	Q	Q	V	I	Q	N	A	C	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																	T	T		B	S							S		T	T				G	G	G		S															S						S	S	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	A	L	I	N	L	L	L	N	C	D	H	P	D	V	D	L	G	P	T	L	K	E	F	K	D	F	T	Y	D	L	D	S	A	S	R	G	L	C	L	T	N	S	E	K	I	R	A	V	H	N	S	F	G	E	D	V	F	H	F	V	T	Y	V	P	V	N	D	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T				T	T		B												T	T	T	S																					T	T														T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	E	L	D	G	L	R	A	A	P	L	R	L	G	T	V	A	S	D	G	D	W	T	E	V	A	I	K	A	I	K	E	K	I	K	N	Y	G	E	S	E	V	R	F	N	L	M	A	V	I	S	D	Q	K	L	K	Y	E	R	E	M	E	K	F	A	Q	A	G	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S									S	S																T	T	S		T	T																												T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	A	E	V	D	R	L	V	A	L	I	A	A	E	D	A	K	R	E	R	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)