PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2wdtA_

Fold library id	PDB Header	Molecule	Title
c2wdtA_	PDB header: hydrolase/protein binding	Chain: A: PDB Molecule: ubiquitin carboxyl-terminal hydrolase l3;	PDBTitle: crystal structure of plasmodium falciparum uchl3 in complex2 with the suicide inhibitor ubvme

Links to external resources
Added to library: Sat Aug 28 20:25:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D I W T P L E S N P D S L Y L Y S C K L G Q S K L K F V D I Y G F N N D L L D M I P Q P V Q A V I F L Y P V N F D N V W F I K Q Y I P N S C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
S S T T S
S
T T S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G T I A L L H L Y G N L R N K F E L D K D S V L D D F F N K V N E M S A E K R G Q E L K N N K S I E N L H H E F C G Q V E N R D D I L D V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T S
T T S T T T S
T T S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence T H F I V F V Q I E G K I I E L D G R K D H P T V H C F T N G D N F L Y D T G K I I Q D K F I E K C K D D L R F S A L A V I P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T S S S
G G G T T T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	W	T	P	L	E	S	N	P	D	S	L	Y	L	Y	S	C	K	L	G	Q	S	K	L	K	F	V	D	I	Y	G	F	N	N	D	L	L	D	M	I	P	Q	P	V	Q	A	V	I	F	L	Y	P	V	N	F	D	N	V	W	F	I	K	Q	Y	I	P	N	S	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T			S									S	S					T	T	S		S														T	T	S							S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	T	I	A	L	L	H	L	Y	G	N	L	R	N	K	F	E	L	D	K	D	S	V	L	D	D	F	F	N	K	V	N	E	M	S	A	E	K	R	G	Q	E	L	K	N	N	K	S	I	E	N	L	H	H	E	F	C	G	Q	V	E	N	R	D	D	I	L	D	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T	T	S				T	T	S									T	T	T	S																				T	T	S	S					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	T	H	F	I	V	F	V	Q	I	E	G	K	I	I	E	L	D	G	R	K	D	H	P	T	V	H	C	F	T	N	G	D	N	F	L	Y	D	T	G	K	I	I	Q	D	K	F	I	E	K	C	K	D	D	L	R	F	S	A	L	A	V	I	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S							T	T	S	S	S									G	G	G													T	T	T	T		S	S