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Job DescriptionA1A547
Confidence100.00%DateWed Jul 10 14:22:40 BST 2013
Rank6Aligned Residues161
% Identity40%Templatec2rkqA_
PDB info PDB header:immune systemChain: A: PDB Molecule:peptidoglycan-recognition protein-sd; PDBTitle: crystal structure of drosophila peptidoglycan recognition2 protein sd (pgrp-sd)
Resolution1.50 Å
Model Dimensions (Å)X:40.891 Y:42.494 Z:34.881

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200. ........210.........220.........230.........240...
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Query Sequence  NITPRSAWEARETHCP. . QMNLPAKFVIIIHTAGKSCNESADCLVRVRDTQSFHIDNQDF
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Template Sequence  PIVTRAEWNAKPPNGAIDSMVTPLPRAVIAHTAGGACADDVTCSQHMRNLQNFQMSKQKF
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TGGGT




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   13......20.........30.........40.........50.........60.........70..
 
   244.....250.........260.........270.........280.........290.........300...
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Query Sequence  CDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAAQSL
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Template Sequence  SDIGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAPNKEALDAAKEL
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S
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TTS

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TTB

SSSGGG
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   72.......80.........90.........100.........110.........120.........130.
 
   304.....310.........320.........330.........340......
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Query Sequence  IQCAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHFK
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Template Sequence  LEQAVKQAQLVEGYKLLGHRQVSATKSPGEALYALIQQWPNWS
Template Known Secondary structure  TTSGGGTSSS
TT
TTSTTB
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   132.......140.........150.........160.........170....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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