Return to main results Retrieve Phyre Job Id

Job DescriptionA1A547
Confidence100.00%DateWed Jul 10 14:22:40 BST 2013
Rank8Aligned Residues162
% Identity37%Templatec2xz4A_
PDB info PDB header:immune systemChain: A: PDB Molecule:peptidoglycan-recognition protein lf; PDBTitle: crystal structure of the lfz ectodomain of the2 peptidoglycan recognition protein lf
Resolution1.72 Å
Model Dimensions (Å)X:40.478 Y:41.326 Z:36.014

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NITPRSAWEARETHC. . PQMNLPAKFVIIIHTAGKSCNESADCLVRVRDTQSFHIDNQDF
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Template Sequence  HILDRSEWLGEPPSGKYPHLKLPVSNIIIHHTATEGCEQEDVCIYRMKTIQAFHMKSFGW
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   58.60.........70.........80.........90.........100.........110.......
 
   244.....250.........260.........270.........280.........290.........300...
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Query Sequence  CDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAAQSL
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Template Sequence  VDIGYNFLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQIEAAKRL
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   118.120.........130.........140.........150.........160.........170.......
 
   304.....310.........320.........330.........340.......
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Query Sequence  IQCAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHFKH
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Template Sequence  MDEGVRLHRLQPDYHIYAHRQLSPTESPGQKLFELMQNWPRFTQ
Template Known Secondary structure  TTSSSS
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   178.180.........190.........200.........210.........220.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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