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Job DescriptionA1A547
Confidence100.00%DateWed Jul 10 14:22:40 BST 2013
Rank13Aligned Residues133
% Identity30%Templatec2xz8A_
PDB info PDB header:immune systemChain: A: PDB Molecule:peptidoglycan-recognition protein lf; PDBTitle: crystal structure of the lfw ectodomain of the2 peptidoglycan recognition protein lf
Resolution1.94 Å
Model Dimensions (Å)X:44.217 Y:41.506 Z:32.028

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40...... ...50.........60.........70.........80.......
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Query Sequence  TIVSRKEWGASSLTCRVP. LSLPVPYLIIEQVTRMQCQDQITCSQVVRVLQSQYVHNKGW
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Template Sequence  KIVTRPYWLAQPPIVPLTPLKLPIESVRFVATNTPSCFTQAECTFRVRLLQNWHIESNGY
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GGGGT



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B

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   235....240.........250.........260.........270.........280.........290....
 
   88.90.........100.........110.........120.........130.........140.......
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Query Sequence  CDIAFNFLVGDDGKVYEGVGWYVQGLHTQGYNNVSLGIAFFGSKIGSPSPAALSATEDLI
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Template Sequence  KDINYNFVAAGDENIYEARGWDHSCEP. . PKDADELVVAFIG. . . . . PSSSNKKIALELI
Template Known Secondary structure  SS
S
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TTS
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SSB


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   295....300.........310.........320. ........330.... .....340.......
 
   148.150.........160........
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Query Sequence  FFAIQNGYLSPKYIQPFLLKE
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Template Sequence  KQGIKLGHISKNYSLIDDLEK
Template Known Secondary structure  TTS



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   348.350.........360........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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