Return to main results Retrieve Phyre Job Id

Job DescriptionA1A547
Confidence16.62%DateWed Jul 10 14:22:40 BST 2013
Rank35Aligned Residues21
% Identity24%Templatec2k6xA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.......
Predicted Secondary structure 




Query SS confidence 




















Query Sequence  PAALSATEDLIFFAIQNGYLS
Query Conservation    

 
   

   
    
 
Alig confidence 




















Template Conservation        

 

  







Template Sequence  PQIERRIKKLISLGKKKGYIT
Template Known Secondary structure  SS
B
Template Predicted Secondary structure 




Template SS confidence 




















   2930.........40.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D